Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04986 and BPUM_3006
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_04986___yvgP.1.24716.seq
# -bsequence pep-align/BPUM_3006.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04986___yvgP-BPUM_3006.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04986___yvgP-BPUM_3006.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04986___yvgP
# 2: BPUM_3006
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 675
# Identity: 424/675 (62.8%)
# Similarity: 535/675 (79.3%)
# Gaps: 9/675 ( 1.3%)
# Score: 2146.5
#
#
#=======================================
BSNT_04986___ 1 MDIFLVVLVLLTIIAISNIVNRFIPFIPVPLIQVALGILAASFPQGLHFE 50
|:|||.|||||.:||.|||:|||:||||||||||.||||.|:||.|||..
BPUM_3006 1 MEIFLAVLVLLALIASSNIINRFVPFIPVPLIQVGLGILVAAFPSGLHIS 50
BSNT_04986___ 51 LNTELFFVLFIAPLLFNDGKRTPRAELWNLRAPILLLALGLVFATVIVGG 100
||.|||||||||||||||||||||.|||.|||||||||||||||||||.|
BPUM_3006 51 LNPELFFVLFIAPLLFNDGKRTPRDELWKLRAPILLLALGLVFATVIVAG 100
BSNT_04986___ 101 YTIHWMIPAIPLAAAFGLAAILSPTDVVAVSALSGRVKMPKGILRLLEGE 150
||||||||:|||.|||.|||||||||||||||||.||.|||||:||||||
BPUM_3006 101 YTIHWMIPSIPLPAAFALAAILSPTDVVAVSALSSRVNMPKGIMRLLEGE 150
BSNT_04986___ 151 GLMNDASGLVAFKFAIAAAVTGAFSLAQAAVSFVFISLGGLLCGVVISFL 200
||||||||||||||||||.||||||:|:|:.|||.|:.||||.|.::||.
BPUM_3006 151 GLMNDASGLVAFKFAIAATVTGAFSIAEASFSFVLIAAGGLLTGFILSFF 200
BSNT_04986___ 201 IIRFRLFLRRLGMQDVTMHMLIQILTPFVIYLGAEEIGVSGILAVVAGGI 250
|||||.|||||||.|||||:::||||||||||.||||||||||||||||:
BPUM_3006 201 IIRFRYFLRRLGMDDVTMHIILQILTPFVIYLAAEEIGVSGILAVVAGGV 250
BSNT_04986___ 251 THAVEQDRLESTMIKLQIVSSSTWNIILFILNGLVFVILGTQIPDVISVI 300
|||:||||:|:.:.||||.||:||||||||||||||||||.|||||.:||
BPUM_3006 251 THAIEQDRMEANLAKLQIASSNTWNIILFILNGLVFVILGLQIPDVSTVI 300
BSNT_04986___ 301 FNDTAISNMKVIGYILVITFTLMLLRFLWVLFFWNGKWFFNKDQNIYKPG 350
|.|.|.:||:||.|||:||..||:||||||..||.|||...|.||:.||.
BPUM_3006 301 FQDEAFNNMQVITYILIITLCLMILRFLWVWLFWAGKWSATKKQNVKKPK 350
BSNT_04986___ 351 LRSTLLISISGVRGAVTLAGSFSIPYFLEDGTPFPERNLILFLAAGVILC 400
||:::|::.|||||||||||:||||:.|.||:|||||:||:|||||||||
BPUM_3006 351 LRASMLMTFSGVRGAVTLAGAFSIPFTLADGSPFPERHLIIFLAAGVILC 400
BSNT_04986___ 401 TLVIATVVLPILTEKEEED--EERNKKLLTARRKLIKTALQTIKEDMNET 448
||::|:|:||:|:||:::. .:.:.|:..|:|||:::|::|::|.|||.
BPUM_3006 401 TLILASVLLPLLSEKKDKQIAVDLDTKIQHAKRKLLRSAIKTLREGMNED 450
BSNT_04986___ 449 NKTASLAVIAEYNEKMKNLRFQQYTSSNRIKKHERKVRAQGVKAEQEALM 498
|:..|||:|.:|..|::|::.:.|... :::.|:|:|..|:||||..|.
BPUM_3006 451 NREVSLALINDYRMKLRNIQREPYQFG--MRRQEKKIRLHGIKAEQMKLQ 498
BSNT_04986___ 499 KMLERGDIPEETANVLQERFNELEILYANPFKVGLSKTRLKRLMYWI-FF 547
:::|...|.::.|..|||||:|||:||:|.||:..||.:..||:.|: .:
BPUM_3006 499 QLIEEEKIDQQEAYELQERFHELEMLYSNSFKIRFSKVKFLRLLQWLQLW 548
BSNT_04986___ 548 GEHKKPEMSILNEAGLIRATRVKTAKAAIEYLEKHKTEEHKEVFLSVISF 597
..::.....||......:..|.|||:||::.:::|..:|:|:....||.|
BPUM_3006 549 RPNQLVSSGILENEDSYKQIRKKTAEAAVDSIKQHMNDENKQTCHQVIGF 598
BSNT_04986___ 598 YKQLIFRLEH--SHHELKSSAHFENQKLEVKLKAVQAIRNEIQTLFEERE 645
|.|:|:|.|| |..:.|..: |:.:|.|:..:|||.||||||||:|..|
BPUM_3006 599 YNQVIYRCEHGPSFFQQKDRS-FDRKKKELNFQAVQTIRNEIQTLYENGE 647
BSNT_04986___ 646 ISRDISHELRQYINDVEAAMLEGGE 670
|:|||:|.||:||||:||.:|...
BPUM_3006 648 INRDIAHHLREYINDMEAVLLTNT- 671
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