Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04992 and BPUM_3007
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_04992___yvgT.1.24716.seq
# -bsequence pep-align/BPUM_3007.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04992___yvgT-BPUM_3007.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04992___yvgT-BPUM_3007.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04992___yvgT
# 2: BPUM_3007
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 164/203 (80.8%)
# Similarity: 180/203 (88.7%)
# Gaps: 0/203 ( 0.0%)
# Score: 841.0
#
#
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BSNT_04992___ 1 MAWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLL 50
||||:||:|||||||:||||||||||||||||||||||||||||||||||
BPUM_3007 1 MAWEVLSIIGIIAFAISGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLL 50
BSNT_04992___ 51 IGVPVSALWEQGAYFQIALLSITIVFLFPKLLLKHWNKWGNLSDAIGLAA 100
||:||||||.||..|.|||:||||||||||||||||:.|||.||||||||
BPUM_3007 51 IGLPVSALWSQGKMFTIALVSITIVFLFPKLLLKHWSTWGNFSDAIGLAA 100
BSNT_04992___ 101 FAIQGALYAVKMGHPLSAVIVAAVLTGSGGGIIRDLLAGRKPLVLKAEIY 150
|||||||:||:...|||||||||:||||||||:|||||||||||||||||
BPUM_3007 101 FAIQGALFAVQRELPLSAVIVAAILTGSGGGIVRDLLAGRKPLVLKAEIY 150
BSNT_04992___ 151 AVWAALGGLIVGLGWLGNSFGLYVLFFVLVVCRVCSYMFNWKLPNRSFRL 200
|||||||||.||||.......||:||.:|||||||||:|.|:||.||:.|
BPUM_3007 151 AVWAALGGLFVGLGLAQGEIALYLLFLILVVCRVCSYLFKWRLPARSYFL 200
BSNT_04992___ 201 DSQ 203
:..
BPUM_3007 201 NKG 203
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