Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06185 and BPUM_3060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence pep-align/BSNT_06185___rocD.1.24716.seq
# -bsequence pep-align/BPUM_3060___rocD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06185___rocD-BPUM_3060___rocD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06185___rocD-BPUM_3060___rocD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06185___rocD
# 2: BPUM_3060___rocD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 312/412 (75.7%)
# Similarity: 356/412 (86.4%)
# Gaps: 15/412 ( 3.6%)
# Score: 1677.0
#
#
#=======================================
BSNT_06185___ 1 MLKQKTRGNSNMTALSKSKEIIDQTSHYGANNYHPLPIVISEALGSWVKD 50
::::||:|.||..|||.||||||||||||.|.||.|
BPUM_3060___r 1 --------------MTQTKELIQQTEQYGAANYHPLPIVISEAEGVWVTD 36
BSNT_06185___ 51 PEGNEYMDMLSAYSAVNQGHRHPKIIQALKDQADKITLTSRAFHNDQLGP 100
||||.||||||||||||||||||:||:|||.|||::||||||||||||||
BPUM_3060___r 37 PEGNRYMDMLSAYSAVNQGHRHPRIIEALKKQADRVTLTSRAFHNDQLGP 86
BSNT_06185___ 101 FYEKTAKLTGKEMILPMNTGAEAVESAVKAARRWAYEVKGVADNQAEIIA 150
:|||..|||.|:|.|||||||||||:|:||||||.|:|||:.:|:|||||
BPUM_3060___r 87 WYEKICKLTNKDMALPMNTGAEAVETAIKAARRWGYDVKGIEENRAEIIA 136
BSNT_06185___ 151 CVGNFHGRTMLAVSLSSEEEYKRGFGPMLPGIKLIPYGDVEALRQAITPN 200
||||||||||.|||||||.||:|||||||||||||||||:||||:||||.
BPUM_3060___r 137 CVGNFHGRTMTAVSLSSEAEYQRGFGPMLPGIKLIPYGDIEALREAITPQ 186
BSNT_06185___ 201 TAAFLFEPIQGEAGIVIPPEGFLQEAAAICKEENVLFIADEIQTGLGRTG 250
|||||.||||||||||:||||||::|.|:|::|:|||||||||.||.|||
BPUM_3060___r 187 TAAFLIEPIQGEAGIVMPPEGFLKDAKALCEQEHVLFIADEIQVGLARTG 236
BSNT_06185___ 251 KTFACDWDGIVPDMYILGKALGGGVFPISCIAADREILGVFNPGSHGSTF 300
|.|||||:.|.|||.|||||||||||||||:.|:|:||.|||||||||||
BPUM_3060___r 237 KMFACDWEDIEPDMLILGKALGGGVFPISCVVANRDILCVFNPGSHGSTF 286
BSNT_06185___ 301 GGNPLACAVSIASLEVLEDEKLADRSLELGEYFKSELESIDNPVIKEVRG 350
||||||||||:|:|:||.|||||.||:|||||||.:|..|.:|:||||||
BPUM_3060___r 287 GGNPLACAVSLAALDVLIDEKLAARSMELGEYFKDKLSRIQSPMIKEVRG 336
BSNT_06185___ 351 RGLFIGVELTEAARPYCERLKEEGLLCKETHDTVIRFAPPLIISKEDLDW 400
||||||:|||||||||||:||:.||||||||:|||||||||.||||||||
BPUM_3060___r 337 RGLFIGMELTEAARPYCEKLKQAGLLCKETHETVIRFAPPLTISKEDLDW 386
BSNT_06185___ 401 AIEKIKHVLQNA 412
||..|:.:.|.
BPUM_3060___r 387 AIGHIEALFQA- 397
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