Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05168 and BPUM_3062
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence pep-align/BSNT_05168.1.24716.seq
# -bsequence pep-align/BPUM_3062.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05168-BPUM_3062.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05168-BPUM_3062.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05168
# 2: BPUM_3062
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity: 152/245 (62.0%)
# Similarity: 191/245 (78.0%)
# Gaps: 5/245 ( 2.0%)
# Score: 749.0
#
#
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BSNT_05168 1 MKYKQIKTKKIYEEVADALLDMIKNGELKPGDKLDSVQALAESFQVSRSA 50
||||||||||||||:||||::.|:.|||.||:||||||||:|||||||||
BPUM_3062 1 MKYKQIKTKKIYEEIADALIESIRTGELLPGEKLDSVQALSESFQVSRSA 50
BSNT_05168 51 VREALSALKAMGLVEMKQGEGTYLKEFELNQISQPLSAALLMKKEDVKQL 100
||||||||||:||:|||||||||:|:|:..|::..||.|.|||:.||:||
BPUM_3062 51 VREALSALKAIGLIEMKQGEGTYVKQFDPEQLAFSLSPAFLMKQHDVRQL 100
BSNT_05168 101 LEVRKLLEIGVASLAAEKRTEADLKRIHDALKEMGSIEADGELGEKADFA 150
||||.::|.|....||..||:.||.::.|||.:|...||..|:||:||..
BPUM_3062 101 LEVRTIIETGAVKKAALLRTDDDLHQLRDALAQMKQAEAREEIGEEADLT 150
BSNT_05168 151 FHLALADASQNELLKHLMNHVSSLLLETMRETRKIWLFSKKTSVQRLYEE 200
||||||.||:|::||.|||.||:||:||||||||:.|||.|.|:::||||
BPUM_3062 151 FHLALAKASKNDILKVLMNQVSTLLVETMRETRKVVLFSTKASIRKLYEE 200
BSNT_05168 201 HERIYNAVAAGNGAQAEAAMLAHLTNVEDVLSGYFEENVQ----- 240
||:||.||.|....:||.|||.||.|||::|....::.|:
BPUM_3062 201 HEQIYKAVMARQPEEAEKAMLTHLKNVENLLGDVLKKPVEQSDTQ 245
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