Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05177 and BPUM_3073
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence pep-align/BSNT_05177___yvfC.1.24716.seq
# -bsequence pep-align/BPUM_3073.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05177___yvfC-BPUM_3073.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05177___yvfC-BPUM_3073.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05177___yvfC
# 2: BPUM_3073
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 202
# Identity: 130/202 (64.4%)
# Similarity: 166/202 (82.2%)
# Gaps: 5/202 ( 2.5%)
# Score: 707.0
#
#
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BSNT_05177___ 1 MILKRLFDLTAAIFLLCCTSVIILFTIAVVRLKIGSPVFFKQVRPGLHGK 50
:||:.|:..|:.||...|::.|....::|.|||:||.|:|.||||:|:
BPUM_3073 1 --MKRMLDVMVALTLLIAGSLLFLLLYGLIRWKIGTPVLFRQKRPGLYGR 48
BSNT_05177___ 51 PFTLYKFRTMTDERDSEGNLLPDEVRLTKTGRLIRKLSIDELPQLLNVLK 100
||.||||||||||||..|.||||.:||||||.||||||:||||||:||||
BPUM_3073 49 PFMLYKFRTMTDERDEHGVLLPDHLRLTKTGALIRKLSLDELPQLVNVLK 98
BSNT_05177___ 101 GDLSLVGPRPLLMDYLPLYTEKQARRHEVKPGITGWAQINGRNAISWEKK 150
|:|||||||||||:|||:|||:|||||.||||||||||:||||.||||:|
BPUM_3073 99 GELSLVGPRPLLMEYLPMYTEEQARRHLVKPGITGWAQVNGRNTISWEEK 148
BSNT_05177___ 151 FELDVWYVDNRSFFLDLKILCLTVRKVLVSEGIQQTNHVTAERFTGSGDV 200
|..|:|||:::||:||:|||.:|:.||:.:||:||.:|.|||:|.|: |:
BPUM_3073 149 FTYDLWYVEHQSFWLDMKILWMTLLKVIKTEGVQQPHHATAEKFKGT-DM 197
BSNT_05177___ 201 SS 202
BPUM_3073 197 -- 197
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