Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05179 and BPUM_3074
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence pep-align/BSNT_05179.1.24716.seq
# -bsequence pep-align/BPUM_3074.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05179-BPUM_3074.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05179-BPUM_3074.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05179
# 2: BPUM_3074
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 247/511 (48.3%)
# Similarity: 334/511 (65.4%)
# Gaps: 36/511 ( 7.0%)
# Score: 1252.0
#
#
#=======================================
BSNT_05179 1 -------------------------MTPFIVKTLGVEAFGFVHLTQNVIN 25
:||:||.||||||||.:|||||:||
BPUM_3074 1 MNRAFLYNASANIMTFVLMMLMSVCLTPYIVHTLGVEAFGLIHLTQNMIN 50
BSNT_05179 26 YFSVITVALSSVVVRFFSVAAHRGEREKANAYISNYLAASVLISLLLLLP 75
|.||||.:||:|||||||||||:||.|||..|:|:|..:|:.:|:.|.|
BPUM_3074 51 YLSVITASLSAVVVRFFSVAAHKGEIEKAQRYLSSYFVSSIFLSISLFL- 99
BSNT_05179 76 LAGSAFFIDRV----MNVPQALLADVRLSILIGSLLFILTFLMAGFGAAP 121
...|:.|. ::||..|..|.:.:.::|.|||:|.|:|:|.||||
BPUM_3074 100 ---FCLFMSRQLVEWLHVPGDLAKDTQTAFILGGLLFMLNFVMSGIGAAP 146
BSNT_05179 122 FYANRLYITSSIQAVQMLIRVLSVLLLFACFAPKIWQIQLAALAGAVIAS 171
||||:||::|..|.:||.:|.|.:::||...||.||.|.||||.|::.|.
BPUM_3074 147 FYANKLYVSSIGQTIQMFLRALMIVMLFTWTAPAIWHIPLAALIGSLAAM 196
BSNT_05179 172 VLSFYFFKKLIPWFSFRMKDLSFRTSKELFQAGAWSSVNQIGVLLFLQID 221
.:..|:||||||||||:.:.:|..:|..|.::|.|.|..|:|:|||||||
BPUM_3074 197 GIGIYYFKKLIPWFSFKWRHVSLSSSLTLVRSGVWHSFEQMGILLFLQID 246
BSNT_05179 222 LLTANLMLGASASGKYAAIIQFPLLLRSLAGTVASLFAPIMTSYYSKGDM 271
||..||::||.|:|:||||:|||||||:||||:|.:|||.:|.:||..|.
BPUM_3074 247 LLMTNLLIGAEATGQYAAILQFPLLLRTLAGTLAVVFAPTITKFYSNQDE 296
BSNT_05179 272 EGLMNYANKAVRLNGLLLALPAALLGGLAGPFLTIWLGPSFSTIAPLLFI 321
|||:.||..|::.:||.:|.|||||||||||.:.:||||:|..:..||.|
BPUM_3074 297 EGLIQYAASAIKWSGLFVAFPAALLGGLAGPLMLLWLGPAFEELKWLLMI 346
BSNT_05179 322 HAGYLVVSLAFMPLFYIWTAFNQQKTPAIVTLLLGAVNVVLAVTLSGPAH 371
||.||.::|.|:||.|:.||||:.|.||:|||:||..||:.|..|:....
BPUM_3074 347 HAAYLCLTLMFLPLTYVPTAFNRLKVPAVVTLILGVSNVLFAYGLTHMLQ 396
BSNT_05179 372 LGLYGITLAGAISLILKNAIFTPLYVSRITGYKKHVFFKGIIGLLSAAVF 421
||||||..||||.|::||.:|.|.|.:|||..|:.:|:|..|..|:.|:.
BPUM_3074 397 LGLYGIASAGAIVLLIKNIVFLPFYTARITKQKRTIFYKHTIVPLAGALM 446
BSNT_05179 422 AWAVCKAIQFVVKIDSWPSLIATGVTVSFCYAVFAFMLVCTKEERQLVLK 471
.|.||..||.:..:.||..|...|....|.|..:.:....||.|||.::.
BPUM_3074 447 IWGVCAGIQAIYDVTSWWELFCIGGFCFFLYLGYLYQFAGTKRERQQLVS 496
BSNT_05179 472 RFRKTKGAVNL 482
|.|.||:.
BPUM_3074 497 ---KVKQAVSR 504
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