Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05282 and BPUM_3108

See DNA alignment / Visit BSNT_05282 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_05282___yvcT.1.24716.seq
#    -bsequence pep-align/BPUM_3108.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05282___yvcT-BPUM_3108.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05282___yvcT-BPUM_3108.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05282___yvcT
# 2: BPUM_3108
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     213/326 (65.3%)
# Similarity:   263/326 (80.7%)
# Gaps:           5/326 ( 1.5%)
# Score: 1124.0
# 
#
#=======================================

BSNT_05282___      1 MKPFVFITKPIPEEIEAFIGEHCRYEVWQ-EDTLPSDVLFEKLKEAEGLL     49
                     |.|.:|:.||:|...|..:.|||.||||| :|.:|.|:||:||:.|:|||
BPUM_3108          1 MTPHIFVAKPLPASFEELLKEHCTYEVWQSKDPIPKDILFQKLQHADGLL     50

BSNT_05282___     50 TSGTSGPSINRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVIGTHTPY     99
                     ||||   .|::|||:||||||||||.||||||||||.|::|||||||||:
BPUM_3108         51 TSGT---KIDQELLDHAPKLKVVSNNSVGYDNFDIEVMRQRGVIGTHTPH     97

BSNT_05282___    100 TLDDTVADLAFSLILSSARRVAELDRFVRAGKWGT-VEEEALFGIDVHHQ    148
                     |||.||||||||||||||||:||||||:|.|.|.. |:||.:||||||||
BPUM_3108         98 TLDHTVADLAFSLILSSARRIAELDRFIREGNWTKFVQEEDIFGIDVHHQ    147

BSNT_05282___    149 TLGIIGMGRIGEQAARRAKFGFDMEVLYHNRHRKQETEDSIGVKYAELDT    198
                     |||||||||||||.|:||..||||.|||:||.|.::.|.:.|..|..||.
BPUM_3108        148 TLGIIGMGRIGEQVAKRAAHGFDMNVLYYNRSRNEKAESAYGALYCTLDD    197

BSNT_05282___    199 LLERSDFILLITPLTDETYHMIGEREFKLMKDSAIFVNISRGKTVDEKAL    248
                     ||:::|.|:|||||||||||||||||.||||.:|:|||||||||||||:|
BPUM_3108        198 LLKQADIIVLITPLTDETYHMIGERELKLMKQTALFVNISRGKTVDEKSL    247

BSNT_05282___    249 IRALQEGWIRGAGLDVYEKEPVSQDNPLLQLDNVTLLPHIGSATAKVRFN    298
                     |:|||||||:||||||:|:||:.:::|..:::||||:|||||||...|..
BPUM_3108        248 IQALQEGWIKGAGLDVFEQEPLQENHPFKEMNNVTLVPHIGSATETTRDL    297

BSNT_05282___    299 MCKQAAENMIAAIQGQTPKNLTREFQ    324
                     |.|:|..|:|..|.|:.|.::.:|..
BPUM_3108        298 MLKRAIHNVIHGIDGKAPIDIVKELA    323


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