Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05292 and BPUM_3114

See DNA alignment / Visit BSNT_05292 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence pep-align/BSNT_05292___yvcK.1.24716.seq
#    -bsequence pep-align/BPUM_3114.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05292___yvcK-BPUM_3114.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05292___yvcK-BPUM_3114.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05292___yvcK
# 2: BPUM_3114
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     257/333 (77.2%)
# Similarity:   284/333 (85.3%)
# Gaps:          16/333 ( 4.8%)
# Score: 1303.0
# 
#
#=======================================

BSNT_05292___      1 MLLTGTLKREAGNKMGQKPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTV     50
                                   |...||:.|.||||||||||||||.|||||||||||
BPUM_3114          1 --------------MTTLPKVVILGGGTGLSVLLRGLKTKPVDITAIVTV     36

BSNT_05292___     51 ADDGGSSGRLRNELKIPPPGDIRNVLAALSDVEPLVEDLFQHRFNKGNDL    100
                     |||||||||||::|.|||||||||||||||||||||||||||||||||||
BPUM_3114         37 ADDGGSSGRLRHDLNIPPPGDIRNVLAALSDVEPLVEDLFQHRFNKGNDL     86

BSNT_05292___    101 TGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGKVLPAANASVVLHAE    150
                     ||||||||||||||||||||||||||||||||||||||||||:|||||||
BPUM_3114         87 TGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGKVLPAANSSVVLHAE    136

BSNT_05292___    151 MEDGRVVSGESTIPEYGQRIKRVFLTPEQIDPLPETIDVIREADLIIIGP    200
                     :|:|:||:|||.||.||:|||||||||:.|:||||:|.||||||||:|||
BPUM_3114        137 LENGQVVTGESKIPTYGERIKRVFLTPDTIEPLPESIQVIREADLIVIGP    186

BSNT_05292___    201 GSLYTSILPNLLVPKIGEEVIKAPAKKVYICNVMTQPGETLHYTAADHVK    250
                     ||||||||||||||.||||||::.|||||||||||||||||.|:|||||:
BPUM_3114        187 GSLYTSILPNLLVPHIGEEVIRSKAKKVYICNVMTQPGETLSYSAADHVQ    236

BSNT_05292___    251 ALNQHMGCGFIDTILVNSEDIPDEIKRKYEMESARPVDFDIEELKAMGLE    300
                     |||.||...|||||.||:::||:|||.||..|.|:||.||.:.|||||||
BPUM_3114        237 ALNDHMVRPFIDTIFVNNKEIPEEIKAKYAEEQAQPVQFDTDVLKAMGLE    286

BSNT_05292___    301 VIRDQIVTYKNDVIRHDTHKVASLLVDLLKE--    331
                     ||..:|:||...||||||.|||:||||||.:  
BPUM_3114        287 VIPGEIITYDQHVIRHDTLKVAALLVDLLHKKK    319


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