Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05368 and BPUM_3173

See DNA alignment / Visit BSNT_05368 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_05368___yvjA.1.24716.seq
#    -bsequence pep-align/BPUM_3173.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05368___yvjA-BPUM_3173.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05368___yvjA-BPUM_3173.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05368___yvjA
# 2: BPUM_3173
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     203/283 (71.7%)
# Similarity:   242/283 (85.5%)
# Gaps:           2/283 ( 0.7%)
# Score: 1043.0
# 
#
#=======================================

BSNT_05368___      1 MMDVRNKTLWI-LRDYVYILVGAAITAVSFNVFLLPNKIAAGGVSGISTI     49
                      |...:..||| .::|::||:|:||.|:.||..||||:||||||||||||
BPUM_3173          1 -MKQGHSQLWIEAKNYLFILIGSAIVAIGFNTLLLPNQIAAGGVSGISTI     49

BSNT_05368___     50 LQSYGFEAAYVQWIINIPLFIAGVILLGGKFGLKTLAGSVFLPLVVFLTR     99
                     :||:|||||||||.:||||||||..||||.||:|||.||:||||:||:||
BPUM_3173         50 MQSFGFEAAYVQWGLNIPLFIAGFYLLGGTFGVKTLVGSIFLPLMVFVTR     99

BSNT_05368___    100 DIQPATHHELLAAIFGGVGIGIGIGIVYLGKGSTGGTALAAQIIHKYSGL    149
                     .|.|.||..|||||||||.||||||:|:||.||||||||||:||:||:||
BPUM_3173        100 HIAPVTHEALLAAIFGGVVIGIGIGLVFLGNGSTGGTALAAKIINKYTGL    149

BSNT_05368___    150 SLGKCLAIIDGMIVVTAMIVFNIEQGLYAMLGVYVSSKTIDVVQVGFNRS    199
                     :||.|||::||:||:.||.||.||:||||::||::|||||||||.||:.|
BPUM_3173        150 TLGTCLAMMDGLIVLAAMTVFGIEEGLYAVIGVFISSKTIDVVQAGFSHS    199

BSNT_05368___    200 KMALIITKQEQAVKEAVLQKIDRGVTKISAVGGYTDDDRPILMCVVGQTE    249
                     |||:|||..|..|::||..:||||||||||||||||.|||||||||||::
BPUM_3173        200 KMAMIITGHEDEVRQAVFDQIDRGVTKISAVGGYTDHDRPILMCVVGQSQ    249

BSNT_05368___    250 FTKLKQIVKQIDESAFVIVADASEVLGEGFKRA    282
                     ||||||:||.||.||||||.||.||||||||||
BPUM_3173        250 FTKLKQVVKAIDASAFVIVMDAKEVLGEGFKRA    282


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