Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05378 and BPUM_3185

See DNA alignment / Visit BSNT_05378 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_05378.1.24716.seq
#    -bsequence pep-align/BPUM_3185___flaG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05378-BPUM_3185___flaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05378-BPUM_3185___flaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05378
# 2: BPUM_3185___flaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      45/113 (39.8%)
# Similarity:    55/113 (48.7%)
# Gaps:          50/113 (44.2%)
# Score: 253.0
# 
#
#=======================================

BSNT_05378         0 --------------------------------------------------      0
                                                                       
BPUM_3185___f      1 MSVGKLTSLEPIIDAFQTRVSNNQNDNVNPDSQANGKVVSKEEIEKTLHG     50

BSNT_05378         1 MNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAA     50
                     .|||:||:|.||:||||:|||||||||:::.|.|||||||.|.|||||||
BPUM_3185___f     51 ANKLIEPTQFHLQFELHEKLNEYYVKVVDNQTEEVIREIPSKEWLDFYAA    100

BSNT_05378        51 MTEFLGLFVDEKK     63
                     |||.:|||||::.
BPUM_3185___f    101 MTEIVGLFVDKRM    113


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