Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05459 and BPUM_3248
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence pep-align/BSNT_05459___gerBA.1.24716.seq
# -bsequence pep-align/BPUM_3248___gerBA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05459___gerBA-BPUM_3248___gerBA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05459___gerBA-BPUM_3248___gerBA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05459___gerBA
# 2: BPUM_3248___gerBA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity: 270/489 (55.2%)
# Similarity: 361/489 (73.8%)
# Gaps: 7/489 ( 1.4%)
# Score: 1382.0
#
#
#=======================================
BSNT_05459___ 1 --MQIDSDLQRNIETLKKKLGQNDDIMFYTFSFGGSRQKACLLYIDGLTE 48
.:|:.|:...|:.:|...|::|||:|::||||.|...|||:|::||||
BPUM_3248___g 1 MKSRIEQDIASVIKRVKSFAGKSDDIVFHSFSFGPSAISACLMYVEGLTE 50
BSNT_05459___ 49 NKLLAQYVISPLQKEALDKKE---GLIEDLSAFFFGYHHNVISTIKEIQQ 95
.::|::.:|||:||| ||..| ..:..||..|||..::|:..:....:
BPUM_3248___g 51 FEMLSKQIISPMQKE-LDITEVDPNTLPALSKTFFGIQNDVLEDMNLAIE 99
BSNT_05459___ 96 LIFSGHAILLADGYSGGLAFDTKTFMTRAFEEPSSEIVERGPKIGFIENL 145
.::||.|||..||.:..||..|..|..|..|||.||::.|||:|||||||
BPUM_3248___g 100 QLYSGRAILFVDGAAQALALQTNLFQFREVEEPQSEVLVRGPRIGFIENL 149
BSNT_05459___ 146 RTNTALLRERTSDPNLIIKEMTIGKRTKKKIAVAYIQDIAPDYVVKEVFK 195
..||||:|||.:||||:|:::.:|.|.||..|:.|::||....:|::|..
BPUM_3248___g 150 EKNTALIRERANDPNLVIQKVNVGTRNKKAAALVYVRDIVDPKLVEDVLS 199
BSNT_05459___ 196 RLKSIITDDLPESGTLEQLIEDEPFSIFPTILSTERPDRVESSLLEGRVS 245
|:..|..||:||:|.:||||||...||||.|.:|||||||.:|:|||:||
BPUM_3248___g 200 RMSEIKMDDIPETGYIEQLIEDSHISIFPQIQNTERPDRVIASVLEGKVS 249
BSNT_05459___ 246 ILVDGTPFALVVPATLDEFIHSPDDYSQRWITMSLIRLLRYSSILITIYL 295
||:|||||||::|.|....:.||:||.|||.:.:|:|||||.::|:||:|
BPUM_3248___g 250 ILLDGTPFALILPMTFTALMQSPEDYYQRWTSATLLRLLRYIAVLLTIFL 299
BSNT_05459___ 296 PGLYISLVSFHTGLLPTRMAISIAGSRLNVPFPPFVEAFIMIFTIELIRE 345
|||||:|||:|.||||||||::|||||.||||||.|||.:|.|||||:||
BPUM_3248___g 300 PGLYIALVSYHPGLLPTRMALTIAGSRQNVPFPPVVEAILMSFTIELLRE 349
BSNT_05459___ 346 AGLRLPKPIGQTIGLIGGVVIGQAAVQAQIVSALMVIVVSVTALASFTVP 395
||||||:.|||||||||||:||||||||.||||||||:||:||||.||.|
BPUM_3248___g 350 AGLRLPRAIGQTIGLIGGVIIGQAAVQANIVSALMVIIVSLTALADFTAP 399
BSNT_05459___ 396 SYAFNFPLRIIRIAAMISAAVLGMYGVIMVFLLVIGHLMRLKSFGQDYII 445
||.|:|||||:|..|:.|:|:.|:||:||.:|.|:.|||:||:||.||..
BPUM_3248___g 400 SYDFSFPLRILRFMAIFSSAMFGLYGLIMCYLFVLCHLMQLKTFGFDYFT 449
BSNT_05459___ 446 PIMAQPGQDLKDTIIRVPTLFLKRRPTRKGTKDKIRQR- 483
|:::.|..|||||.:|:|....|.||.....|:..||.
BPUM_3248___g 450 PVLSSPFSDLKDTYVRLPIGLFKSRPKTAKIKNLKRQGD 488
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