Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05465 and BPUM_3253
See
DNA alignment /
Visit
BSNT_05465 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence pep-align/BSNT_05465___ywtF.1.24716.seq
# -bsequence pep-align/BPUM_3253___ywtF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05465___ywtF-BPUM_3253___ywtF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05465___ywtF-BPUM_3253___ywtF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05465___ywtF
# 2: BPUM_3253___ywtF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity: 197/329 (59.9%)
# Similarity: 253/329 (76.9%)
# Gaps: 9/329 ( 2.7%)
# Score: 1011.0
#
#
#=======================================
BSNT_05465___ 1 MEERLQHKKKKRRLKKWVKFTIGLFAILIIVTGSIGTYAYIKLNNASKQA 50
|::....::.|:|||.|||.|:.:..||::.|.|:..|||.|:.:|:|:|
BPUM_3253___y 1 MDQSRSKRQGKKRLKPWVKVTLFIVGILLLTTASVTGYAYYKVTSAAKKA 50
BSNT_05465___ 51 HIDLNENGQSVKRIKEFDPKKDSFTVLLLGIDSRNSKGETVDDARSDANV 100
.:.|:...||||||:.|||.||||:||||||||| .||||..|||||.|
BPUM_3253___y 51 QVSLDRGAQSVKRIEAFDPGKDSFSVLLLGIDSR--PGETVKQARSDAMV 98
BSNT_05465___ 101 LVTFNRKNKSATMLSIPRDSYVNIPGYGYDKFTHAHAYGGVKLSAKTIEN 150
|.|.||.||:..:|||||||||||||:||||.|||||:||..|:..|:||
BPUM_3253___y 99 LATVNRTNKTVKLLSIPRDSYVNIPGHGYDKITHAHAFGGADLTLSTVEN 148
BSNT_05465___ 151 LLDIPVDYVIESNFDAFKDVVDELNGVSINVKNEKIVNQIKKDTKGKVTL 200
|||||||:||:|||.|||::|:||||||||||::.:|.|:.|||||||.|
BPUM_3253___y 149 LLDIPVDFVIQSNFKAFKEIVNELNGVSINVKDDYVVKQVLKDTKGKVQL 198
BSNT_05465___ 201 KTGVQTLNGEEALAYVRTRKADTDFQRGQRQMEVLNAIIKKSKSLSSIPA 250
:||..||:|::|||||||||||:|..|||||||||.||..|||||:|||:
BPUM_3253___y 199 QTGTHTLDGDQALAYVRTRKADSDLLRGQRQMEVLKAIFDKSKSLTSIPS 248
BSNT_05465___ 251 YDDIVDSLGENLKMNLSLNDAIGLFPFITSLKSVDTEQLTGSDMYLYSSR 300
||:|:|:||:|:..|||:.:.:||||.:|||||:||.||.|||.
BPUM_3253___y 249 YDNIIDTLGDNVATNLSMKELVGLFPLLTSLKSMDTIQLKGSDY------ 292
BSNT_05465___ 301 ERKKLYYLKLDSEKLEEVKTELKNDIDN- 328
:...:||.:||..:|.|||||||..::.
BPUM_3253___y 293 QPNGVYYFQLDQNQLNEVKTELKKQLELS 321
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.