Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05509 and BPUM_3274
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_05509___ywrB.1.24716.seq
# -bsequence pep-align/BPUM_3274___ywrB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05509___ywrB-BPUM_3274___ywrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05509___ywrB-BPUM_3274___ywrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05509___ywrB
# 2: BPUM_3274___ywrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 135/197 (68.5%)
# Similarity: 159/197 (80.7%)
# Gaps: 14/197 ( 7.1%)
# Score: 706.0
#
#
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BSNT_05509___ 1 MKNHPYRDMTAAMVRTGILGFGGGPSVIPLIRHEAVNKYKWIDDDEFGEI 50
|||||||||||||||||||||||:.||:|::||||||.
BPUM_3274___y 1 ------------MVRTGILGFGGGPSVIPLIRHEAMVKYQWVNDDEFGET 38
BSNT_05509___ 51 LAIANALPGPIATKMAAYLGFKLKGTIGAVVATLAHILPTCLAMVGLFAA 100
|||||||||||||||:||||::|||..||:|||.|||||||||||.|...
BPUM_3274___y 39 LAIANALPGPIATKMSAYLGYRLKGVSGAIVATAAHILPTCLAMVALVTL 88
BSNT_05509___ 101 VNVLSHSAIVAGMIGAVTPVIAVMLGIMAYEFGQKALKGFGWVTGILFFI 150
|:|||.|.|:..|||||||||||:|||||||||||.|||||.:.||..|:
BPUM_3274___y 89 VSVLSSSQIIQNMIGAVTPVIAVLLGIMAYEFGQKTLKGFGMIFGIALFL 138
BSNT_05509___ 151 IAFIGLQTLQINPGLVIIIFLAYGAFHFKLKDKITNKHSKDKGMSAS 197
:||||||.|.|:||:::||||.|||||||||.: .|:.:|:||:|:
BPUM_3274___y 139 LAFIGLQVLSIHPGIIVIIFLCYGAFHFKLKQR-WNRPNKEKGVSS- 183
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