Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05580 and BPUM_3302

See DNA alignment / Visit BSNT_05580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:11
# Commandline: needle
#    -asequence pep-align/BSNT_05580___spoIIQ.1.24716.seq
#    -bsequence pep-align/BPUM_3302___spoIIQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05580___spoIIQ-BPUM_3302___spoIIQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05580___spoIIQ-BPUM_3302___spoIIQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05580___spoIIQ
# 2: BPUM_3302___spoIIQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     197/304 (64.8%)
# Similarity:   247/304 (81.2%)
# Gaps:          20/304 ( 6.6%)
# Score: 975.0
# 
#
#=======================================

BSNT_05580___      1 MREEEKK-TSQVKKLQQFFRKRWVFPAIYLVSAAVILTAVLWYQSVSNDE     49
                     ||||||| ||::.|:||||||||||||||||||||:||||||||:||.| 
BPUM_3302___s      1 MREEEKKRTSKITKVQQFFRKRWVFPAIYLVSAAVVLTAVLWYQAVSKD-     49

BSNT_05580___     50 VKDQLADNGGNSAYDNNDDAVEVGKSMENVAMPVVDSENVSVVKKFYETD     99
                     |||||:| |..:..:..||||||||.:|||||||.:|:||||||||||.|
BPUM_3302___s     50 VKDQLSD-GNQTGQEQRDDAVEVGKPIENVAMPVQNSDNVSVVKKFYEAD     98

BSNT_05580___    100 AAKEEKEAALVTYNNTYSLSKGIDLAEKDGKDFDVSASLSGTVVKAEKDP    149
                     |.::|||||||.|||||:||||||||:||||.|||:|:||||||:|:|||
BPUM_3302___s     99 ADQKEKEAALVNYNNTYTLSKGIDLADKDGKVFDVTAALSGTVVQAKKDP    148

BSNT_05580___    150 VLGYVVEVEHADGLSTVYQSLSEVSVEQGDKVKQNQVIGKSGKNLYSEDS    199
                     |||:|||:||.|||||||||||:|||::||:||||.|||.||||||..:|
BPUM_3302___s    149 VLGHVVEIEHEDGLSTVYQSLSQVSVKEGDEVKQNDVIGASGKNLYGAES    198

BSNT_05580___    200 GNHVHFEIRKDGVAMNPLNFMDKPVSSIEKAAAAEEKAATQETEESIQQS    249
                     |||||||||.:|:|:|||:|:|||||:|||||    :..|:|.:|..|..
BPUM_3302___s    199 GNHVHFEIRMEGLALNPLSFIDKPVSTIEKAA----QEVTEEAKEPAQPK    244

BSNT_05580___    250 SEK--KDGSTEKGTEEKSGEKKDDSTDKSG-----------SKESSTTED    286
                     :::  |:.:.|...:|.:|||.::.:|:.|           ||:||.:|:
BPUM_3302___s    245 ADEKTKEPAAEDKVKEPAGEKSEEKSDEKGKSSDQEKSSDSSKDSSQSEE    294

BSNT_05580___    287 TEQS    290
                     |:||
BPUM_3302___s    295 TKQS    298


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