Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00594 and BPUM_3311

See DNA alignment / Visit BSNT_00594 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:23
# Commandline: needle
#    -asequence pep-align/BSNT_00594.1.24716.seq
#    -bsequence pep-align/BPUM_3311___yciC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00594-BPUM_3311___yciC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00594-BPUM_3311___yciC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00594
# 2: BPUM_3311___yciC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity:     173/398 (43.5%)
# Similarity:   196/398 (49.2%)
# Gaps:         171/398 (43.0%)
# Score: 886.0
# 
#
#=======================================

BSNT_00594         1 -MKKIPVTVLSGYLGAGKTTLLNSILQNREGLKIAVIVNDMSEVNIDAGL     49
                      .|:||||||||:|||||||:||.:||||:|||:|||||||||:||||.|
BPUM_3311___y      1 MNKRIPVTVLSGFLGAGKTTILNHVLQNRKGLKVAVIVNDMSEINIDAEL     50

BSNT_00594        50 VKQEGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLAKDGRFDYIVIES     99
                     |||.|.|||:||||||:||||||||||||||||||:|.|.|..|||||||
BPUM_3311___y     51 VKQGGELSRSDEKLVELSNGCICCTLREDLLIEVERLCKTGHIDYIVIES    100

BSNT_00594       100 TGISEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDANRFWHDYQSGE    149
                     |||||||||||||||||||||||||:||:||||||||||||||.|:||||
BPUM_3311___y    101 TGISEPIPVAQTFSYIDEEMGIDLTRFCRLDTMVTVVDANRFWTDFQSGE    150

BSNT_00594       150 SLLDRKEALGEEDEREIADLLIDQIEFCDVLILNKCDLVSEQELEQLENV    199
                     ||||||:|:.|:|||||:||||||||||||||:|||||||..||::||:|
BPUM_3311___y    151 SLLDRKQAVSEDDEREISDLLIDQIEFCDVLIINKCDLVSNSELDRLEHV    200

BSNT_00594       200 LRKLQPRAKFIRCQRKCKTAGDFAYRVI----------------------    227
                     |..|||.|..||..:......|.....:                      
BPUM_3311___y    201 LTTLQPEASIIRTSKGQVKPSDILNTGLFDFEKSSASAGWIKEINAGHSQ    250

BSNT_00594       227 --------------------------------------------------    227
                                                                       
BPUM_3311___y    251 HTPETEEYNISSFVYERRLPFHTSRLNHWLDQMPEQIVRAKGFTWLATHH    300

BSNT_00594       227 --------------------------------------------------    227
                                                                       
BPUM_3311___y    301 DLTILISQAGKSVQIEPIAYWIAALPEQEKAQILKQEPELLDEWDAEFGD    350

BSNT_00594       227 ------------------------------------------------    227
                                                                     
BPUM_3311___y    351 RHTKLVFIGVDLPKADIIRTLDQCLLTHEEFDQDWTTFEDPFQWKIQH    398


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