Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05611 and BPUM_3319
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence pep-align/BSNT_05611___ywmC.1.24716.seq
# -bsequence pep-align/BPUM_3319___ywmC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05611___ywmC-BPUM_3319___ywmC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05611___ywmC-BPUM_3319___ywmC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05611___ywmC
# 2: BPUM_3319___ywmC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 116/233 (49.8%)
# Similarity: 160/233 (68.7%)
# Gaps: 6/233 ( 2.6%)
# Score: 601.0
#
#
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BSNT_05611___ 1 --MKKRLSLIMMT--GLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGS 46
:||..:|:.:. .|...::||.||...|..:......|.:|||||||
BPUM_3319___y 1 MMLKKVFTLVTLAVLTLSMSISSPVFAKASTVKKHNKDVRVTILLDASGS 50
BSNT_05611___ 47 MAKRIDGVSKFNSAKKEISKFASSLPEGTQVKMSVFGSEGNNKNSGKVQS 96
||::::|..||:.||:|:.|||.|||:..:::||:||||||||||||.||
BPUM_3319___y 51 MARKVEGERKFDLAKQEVFKFAQSLPKDAKIRMSLFGSEGNNKNSGKAQS 100
BSNT_05611___ 97 CEAIRNVYGFQSFNEQSFLNSLNTIGPTGWTPIAKALNEAKSSFDQLDAK 146
||.||.|||.|.:.::||.||||.:||.||||||:||..||.:.:||:..
BPUM_3319___y 101 CEVIRGVYGVQPYEKESFENSLNGLGPNGWTPIARALEHAKQTDEQLNNG 150
BSNT_05611___ 147 GEKVVYLLTDGEETCGGNPIKTAKEL--QKENITVNVIGFDYKEGYKGQL 194
.:.:|||:|||||||||:|:|.|||| .|.:..|||||.|:.:||:|||
BPUM_3319___y 151 TKHIVYLITDGEETCGGDPVKVAKELHNSKGSTVVNVIGLDFNDGYEGQL 200
BSNT_05611___ 195 NAIAKVGGGEYFPVYTQKDVEKIFTQQSLMLSK 227
..:||.|.|.|:...|.|::..|.:.:||.|.:
BPUM_3319___y 201 KQVAKAGKGHYYQASTGKEMGSILSAESLKLHE 233
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