Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05658 and BPUM_3349

See DNA alignment / Visit BSNT_05658 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:15
# Commandline: needle
#    -asequence pep-align/BSNT_05658___tdk.1.24716.seq
#    -bsequence pep-align/BPUM_3349___tdk.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05658___tdk-BPUM_3349___tdk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05658___tdk-BPUM_3349___tdk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05658___tdk
# 2: BPUM_3349___tdk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity:     150/200 (75.0%)
# Similarity:   171/200 (85.5%)
# Gaps:           5/200 ( 2.5%)
# Score: 804.0
# 
#
#=======================================

BSNT_05658___      1 MYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRY     50
                     ||:||||||||:||||||||||||||||.||||:|||||::|||.|||||
BPUM_3349___t      1 MYVMKQSGWLEVICGSMFSGKSEELIRRAKRATFAKQEVKIFKPAIDNRY     50

BSNT_05658___     51 SEAAVVSHNGTSMTSYAISSAADIWDHISESTDVIAVDEVQFFDQEIVEV    100
                     |.::||||||:|:...|::|..||..||||.||||.:|||||||:.|:::
BPUM_3349___t     51 STSSVVSHNGSSVDGIAVASPKDIITHISERTDVIGIDEVQFFDETIIDI    100

BSNT_05658___    101 LSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGS    150
                     ::.|||||||||.||||.|||||||||||::||.||.|||||||||||||
BPUM_3349___t    101 VTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVCSVCGS    150

BSNT_05658___    151 PASRTQRLIDGKPASYDDPVILVGASESYEARCRHHHEVPGKSKK-----    195
                     |||||||||||||||||||:|||||.||||||||||||||.....     
BPUM_3349___t    151 PASRTQRLIDGKPASYDDPIILVGAQESYEARCRHHHEVPRLDVGTTLDN    200


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