Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05685 and BPUM_3377

See DNA alignment / Visit BSNT_05685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:17
# Commandline: needle
#    -asequence pep-align/BSNT_05685.1.24716.seq
#    -bsequence pep-align/BPUM_3377___ywjC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05685-BPUM_3377___ywjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05685-BPUM_3377___ywjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05685
# 2: BPUM_3377___ywjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 91
# Identity:      35/91 (38.5%)
# Similarity:    47/91 (51.6%)
# Gaps:          32/91 (35.2%)
# Score: 194.0
# 
#
#=======================================

BSNT_05685         1 ------------------------MCHSGSHEVYIYSKKTMCKIKSLIEL     26
                                             .||...|.:|:|||||||.||:::||
BPUM_3377___y      1 MSQIYSIQIAAKALNLHKLISLYEKCHQAQHRLYVYSKKTMCNIKNIVEL     50

BSNT_05685        27 ETFRMAHNEKEYLIVVEGTKASQLIEKFQNLIEPAEREAL-     66
                     ||||:.|.|.:|||||||.||       |:|::|.|:|.: 
BPUM_3377___y     51 ETFRLTHLESDYLIVVEGKKA-------QDLLQPFEKEKVS     84


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