Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05688 and BPUM_3379
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence pep-align/BSNT_05688.1.24716.seq
# -bsequence pep-align/BPUM_3379___ywjA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05688-BPUM_3379___ywjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05688-BPUM_3379___ywjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05688
# 2: BPUM_3379___ywjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 575
# Identity: 386/575 (67.1%)
# Similarity: 438/575 (76.2%)
# Gaps: 83/575 (14.4%)
# Score: 2026.0
#
#
#=======================================
BSNT_05688 0 -------------------------------------------------- 0
BPUM_3379___y 1 MLKRFFAYYRPYRGLFFLDFFCAVAVGLMELGFPLIVNYFIDTLLPTGNW 50
BSNT_05688 1 -----------------------------MLGINIETDMRKSLFDHLQKL 21
||||||||||||.||||.|:|
BPUM_3379___y 51 TIIVWTALALFVIYALSSVMQFIVSYWGHMLGINIETDMRKKLFDHFQRL 100
BSNT_05688 22 SFKFYDNNKTGTLMSKLTNDLMYIGEVAHHGPEDLFIAVMTILGAFGVML 71
||||:||||||.|||::|||||||||||||||||||||:|||||||.|||
BPUM_3379___y 101 SFKFFDNNKTGKLMSRMTNDLMYIGEVAHHGPEDLFIAIMTILGAFAVML 150
BSNT_05688 72 FINWQLALLTFIIMPIVIWLALYFNKKMTKAFTTLNKDIGDFSARVENNI 121
.||||||:|||:|||::|||||:||||||||.|.||.|||||.|||||||
BPUM_3379___y 151 MINWQLAILTFLIMPVIIWLALHFNKKMTKAITQLNNDIGDFHARVENNI 200
BSNT_05688 122 GGIRLVQAFGNEAFEKERFAVNNQRFRATKLSSYKIMAKNGSISYMLTRF 171
|||||||||.||.|||:|||.||.|||..||.|||||:.||||||:|||.
BPUM_3379___y 201 GGIRLVQAFANEHFEKKRFAENNNRFRKAKLLSYKIMSVNGSISYILTRL 250
BSNT_05688 172 VTLFVLLCGTWFVIRGSLSYGEFVAFVLLTNVLFRPIDKINAIIEMYPRG 221
|||||||.|||||::|.|:.|.|:||||:||||||||||||.:|||||:|
BPUM_3379___y 251 VTLFVLLAGTWFVLQGQLTAGGFIAFVLITNVLFRPIDKINTVIEMYPKG 300
BSNT_05688 222 IAGFKSYMELMETEPDIQDSPDARDVSGLKGNIRYKHVSFGYDGHHNVLN 271
|||||||::|:|||||::|:..||||.||||.|.|::|:||||.|.:||.
BPUM_3379___y 301 IAGFKSYVDLLETEPDVKDTEGARDVYGLKGEIEYRNVTFGYDEHSHVLK 350
BSNT_05688 272 DINLSIQAGETVAFVGPSGAGKSTLCSLLPRFYEASEGDITIDGISIKDM 321
:|:|.|:.||||||||||||||||:||||||||:..||:|||||||.|.|
BPUM_3379___y 351 NIDLKIKQGETVAFVGPSGAGKSTICSLLPRFYDLDEGEITIDGISTKSM 400
BSNT_05688 322 TLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGASEEDIWQAVKQAHLEE 371
||||||.|||:|||||||||||:|||||||.|.||:.::|:||::|||||
BPUM_3379___y 401 TLSSLRQQIGIVQQDVFLFSGTIRENIAYGNLEASDAEVWEAVRRAHLEE 450
BSNT_05688 372 LVHNMPDGLDTMIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSAL 421
||...|:||:|:||||||||||||||||||||||||||||||||||||||
BPUM_3379___y 451 LVQRFPEGLNTVIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSAL 500
BSNT_05688 422 DTETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQGR 471
|||||.|||.||.||:.|||||||||||||||.||||:|||..|||||||
BPUM_3379___y 501 DTETEKAIQDALSELAVGRTTLVIAHRLATIKHADRIIVVTEEGIEEQGR 550
BSNT_05688 472 HQDLIEAGGLYSRLHQVQFGQIVQR 496
|||||:.||:|||||:.|||.
BPUM_3379___y 551 HQDLIQMGGVYSRLHEAQFGH---- 571
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