Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05736 and BPUM_3388
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence pep-align/BSNT_05736___ywhE.1.24716.seq
# -bsequence pep-align/BPUM_3388___ywhE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05736___ywhE-BPUM_3388___ywhE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05736___ywhE-BPUM_3388___ywhE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05736___ywhE
# 2: BPUM_3388___ywhE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 695
# Identity: 471/695 (67.8%)
# Similarity: 572/695 (82.3%)
# Gaps: 10/695 ( 1.4%)
# Score: 2505.5
#
#
#=======================================
BSNT_05736___ 1 MDA-MTNKRLRLTLKTVRAFIFLGAFAALAAAAVFMTVILIAKYQGAPSV 49
||. |:||::|:|:||:||..|:|..|.|.|..||:|::||||:||||||
BPUM_3388___y 1 MDTIMSNKKIRMTVKTIRACFFIGLLAFLFAGTVFLTILLIAKWQGAPSV 50
BSNT_05736___ 50 QVPQSTILYASDGSKLGETNYGEKRYWVPLKDMNPTIVKATVAIEDQNFY 99
||||||.:||:|||||||:::||||||||||||:|.|.:|.||:||:.||
BPUM_3388___y 51 QVPQSTTIYAADGSKLGESSFGEKRYWVPLKDMSPHIRQAAVAVEDKTFY 100
BSNT_05736___ 100 DHHGFDYKRMAGAALADLKAFAKVQGASTITQQYARNLYLEHDKTWKRKW 149
:|||||.|||||||:||::|.|||||||||||||||||||:|||||||||
BPUM_3388___y 101 EHHGFDVKRMAGAAVADIRAMAKVQGASTITQQYARNLYLDHDKTWKRKW 150
BSNT_05736___ 150 NEAFYTIRLEQNYSKDEILEGYLNTIYYGHGAYGIEAASRLYFGKHAKNL 199
|||||||||||||:||||||||||||||||||||:||||||||||.||||
BPUM_3388___y 151 NEAFYTIRLEQNYTKDEILEGYLNTIYYGHGAYGVEAASRLYFGKKAKNL 200
BSNT_05736___ 200 TDAEAALLAGIPKGPSGYSPYVNETKAKERQKTIVRMMEKQQMISQKKAD 249
|.||:|||||||||||.|||||||.||..|:..|:|.|::..||::|.|.
BPUM_3388___y 201 TLAESALLAGIPKGPSLYSPYVNEEKAGARKNMILRHMQEDGMITKKAAA 250
BSNT_05736___ 250 ELIKEPLSYQPL-NKQVSKRKAPYFYDNAMRELEKKLGMTREQIETSGLN 298
|..||.|||:|| .||:..::||||||:.:|||::.||:|.|||||.||:
BPUM_3388___y 251 EAAKEKLSYRPLQKKQLQAKQAPYFYDDVVRELKQTLGLTEEQIETYGLH 300
BSNT_05736___ 299 VYTTVDKRMQRIAEETITETVNAGSDIQVGFSAIDPRTGNVLALVGGRDY 348
:.||:...:|:|||:|:..|:::.|||||||:||.|:||:||||:|||||
BPUM_3388___y 301 IQTTLHPELQKIAEKTLKSTIDSKSDIQVGFTAIHPQTGHVLALIGGRDY 350
BSNT_05736___ 349 QKSPFDRTTQAKRQPASTIKPLLYYKAIQSGFTPVTLMKSEETEFQID-- 396
:||||:|.|||||||.||:||||||.|:|:||||.|:|:||||.|::|
BPUM_3388___y 351 EKSPFNRVTQAKRQPGSTMKPLLYYMALQNGFTPATVMRSEETVFELDDQ 400
BSNT_05736___ 397 AKGETYSPSNYNGYYANKPITLLQALALSDNIYAVKTHLFLGTNKLVKTA 446
..|..||||||:|||||..||:||||||||||||||||||||..:||:..
BPUM_3388___y 401 GSGAAYSPSNYHGYYANDGITMLQALALSDNIYAVKTHLFLGMEQLVRAG 450
BSNT_05736___ 447 KEFGITAHLQALPSLALGTEPVRPIEMVNAYAMLANGGKKIEPTFISRVT 496
|.|||...|..:|||||||.||:||||.||||||.||||:::||||::||
BPUM_3388___y 451 KTFGINEKLDQVPSLALGTSPVKPIEMTNAYAMLVNGGKRVKPTFITKVT 500
BSNT_05736___ 497 DAAGHVLYENPNQHKQVLDEKAAFVTASMMTGMFDTDLNGYTSVTGRTIA 546
||.|:||:|...:.:|||||||||||..||:|||:..||||||||||||.
BPUM_3388___y 501 DAKGNVLFEEKQKREQVLDEKAAFVTTDMMSGMFNDQLNGYTSVTGRTIM 550
BSNT_05736___ 547 NRLTRTYAGKSGTTSADSWMIGFNPKLAAGVWTGYDKNSTIDSVEEKSYA 596
..|||||.||||||.||||||||:|:|..||||||||..|||||||.:||
BPUM_3388___y 551 KDLTRTYGGKSGTTGADSWMIGFSPQLVTGVWTGYDKGRTIDSVEETAYA 600
BSNT_05736___ 597 KTIWADFMENALKGDPETAFKPPKGVTGVYIDPETGYSSGPGCAAKHYTY 646
|.|||.|||:||...|.::|.||.||.||||:|:||..:||||.:|.:||
BPUM_3388___y 601 KKIWASFMESALSKQPASSFMPPDGVKGVYINPKTGDLAGPGCESKVFTY 650
BSNT_05736___ 647 FVKGTEPANVCYGAEPAKQTKDRLPSKEKPASEKKWWDKWLGRHH 691
|::||||..|||||| .|.:::.....:|| ||||:|||.|
BPUM_3388___y 651 FIEGTEPTGVCYGAE-NKSSENHPVQDQKP---KKWWEKWLKR-- 689
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