Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05754 and BPUM_3395

See DNA alignment / Visit BSNT_05754 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_05754___ywzC.1.24716.seq
#    -bsequence pep-align/BPUM_3395___ywzC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05754___ywzC-BPUM_3395___ywzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05754___ywzC-BPUM_3395___ywzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05754___ywzC
# 2: BPUM_3395___ywzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 96
# Identity:      63/96 (65.6%)
# Similarity:    71/96 (74.0%)
# Gaps:          23/96 (24.0%)
# Score: 359.0
# 
#
#=======================================

BSNT_05754___      1 ----------------------MANEFRVCDDCQATNIKTLLPRLKEVDP     28
                                           |||||||||||.|||:||||||||.|||
BPUM_3395___y      1 MTLGCPTVSYKMKFIIERKRKTMANEFRVCDDCDATNLKTLLPRLKSVDP     50

BSNT_05754___     29 DAKVEVGCQSYCGPGRKKSFAFVNNRPLSAPTEDELIDKVKKKIKK     74
                     |||:|:||||||||||||:|||||||||||||||||::||:||:| 
BPUM_3395___y     51 DAKIEIGCQSYCGPGRKKAFAFVNNRPLSAPTEDELLEKVQKKVK-     95


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