Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05756 and BPUM_3396

See DNA alignment / Visit BSNT_05756 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_05756___rsfA.1.24716.seq
#    -bsequence pep-align/BPUM_3396___rsfA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05756___rsfA-BPUM_3396___rsfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05756___rsfA-BPUM_3396___rsfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05756___rsfA
# 2: BPUM_3396___rsfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     195/271 (72.0%)
# Similarity:   222/271 (81.9%)
# Gaps:          18/271 ( 6.6%)
# Score: 942.5
# 
#
#=======================================

BSNT_05756___      1 MTKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACG     50
                     |:||||||||||:|||||||||||||||||||||||||||||||||||||
BPUM_3396___r      1 MSKQRQDAWSEEDDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACG     50

BSNT_05756___     51 FRWNAVVRHQYEKALQLAKKQRKQRMRALGNGQPAKKRLLYQPPAVDPEI    100
                     |||||||||||||||.|||||||||||||||||||||||||| |.|:..:
BPUM_3396___r     51 FRWNAVVRHQYEKALALAKKQRKQRMRALGNGQPAKKRLLYQ-PQVEETV     99

BSNT_05756___    101 IQETAAE--EPVKTETPSVENEQPLMSGEHMPFVDESFKEELASLSHLLS    148
                     .||..::  ||.|.||.:..:|    :.|.:.|||:|:.|||||||||||
BPUM_3396___r    100 TQEEFSQELEPAKEETFAPASE----TAEQLQFVDQSYNEELASLSHLLS    145

BSNT_05756___    149 ------PQTPAAAP-----EMTMNDVIRFLQNYEGNNEQSSALKMENERL    187
                           .:.|.|.|     |:|:.|||.||:.|||:.:|||:|:|||.||
BPUM_3396___r    146 QASHVVEKKPEANPFRQQQELTIEDVIDFLRRYEGDGQQSSSLRMENSRL    195

BSNT_05756___    188 KKENQELQNKTEQLEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEE    237
                     |:||.||.:|..||||||:||||||.||||||||||||||||||||||||
BPUM_3396___r    196 KRENNELSHKVTQLEAEVKKLEKDQLTIQEDYETLVKIMNRARKLVLFEE    245

BSNT_05756___    238 DEHASPSFKMDRNGNLEKLAE    258
                     |:.|:|:|||||||||||:||
BPUM_3396___r    246 DDTAAPTFKMDRNGNLEKMAE    266


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