Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05809 and BPUM_3442

See DNA alignment / Visit BSNT_05809 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence pep-align/BSNT_05809___ywdI.1.24716.seq
#    -bsequence pep-align/BPUM_3442___ywdI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05809___ywdI-BPUM_3442___ywdI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05809___ywdI-BPUM_3442___ywdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05809___ywdI
# 2: BPUM_3442___ywdI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      59/110 (53.6%)
# Similarity:    83/110 (75.5%)
# Gaps:           5/110 ( 4.5%)
# Score: 306.5
# 
#
#=======================================

BSNT_05809___      1 MNIHISALIQKMEEELKKAKTAERDEELKRYVAVVRSLCDVVLDQPENVS     50
                     ||||||:|:|||:|.::|||.:..|||:||.||.:.|||||:||.|..|.
BPUM_3442___y      1 MNIHISSLLQKMDEAVQKAKQSGNDEEVKRQVAAISSLCDVILDAPSQVQ     50

BSNT_05809___     51 APRI----QPSVTPSPAAPP-STDQLMMEKMMGSAGLNKFRKQEKEKQEE     95
                     .|:.    .||...:|:||| |:||.|:||:||::|..||:.||:.::|:
BPUM_3442___y     51 MPQTPVISPPSSIQTPSAPPVSSDQAMLEKLMGASGAKKFQHQEEGQKEK    100

BSNT_05809___     96 DGNGESLFDF    105
                     ||||:|:|||
BPUM_3442___y    101 DGNGDSIFDF    110


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