Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05826 and BPUM_3457
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence pep-align/BSNT_05826___ywcH.1.24716.seq
# -bsequence pep-align/BPUM_3457___ywcH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05826___ywcH-BPUM_3457___ywcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05826___ywcH-BPUM_3457___ywcH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05826___ywcH
# 2: BPUM_3457___ywcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 217/334 (65.0%)
# Similarity: 263/334 (78.7%)
# Gaps: 2/334 ( 0.6%)
# Score: 1118.0
#
#
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BSNT_05826___ 1 MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKR 50
:.||||||||:...:....||:|||.||:.||..||.||||||||||.|
BPUM_3457___y 1 -MKLSILDQSPLIGDATPAEALKQTVELAKQAEKWGYHRFWVSEHHFSNR 49
BSNT_05826___ 51 LAGSSPEVLISHIAAKTKRIRVGSGGVMLPHYSAYKVAENFRVLEGLTPG 100
|||||||||:.|::|.|..||:|||||||||||||||||||||||.|.||
BPUM_3457___y 50 LAGSSPEVLLGHLSAVTSHIRIGSGGVMLPHYSAYKVAENFRVLEALAPG 99
BSNT_05826___ 101 RIDLGLGRAPGGMPIASWALNDG-GKRNADQYPQQIKELTMYLHDLADDK 149
|||||:|||||||||:|.||:.| .||..||||:|::||.:|||||||:.
BPUM_3457___y 100 RIDLGIGRAPGGMPISSIALHHGERKRLGDQYPEQVEELKVYLHDLADEF 149
BSNT_05826___ 150 HRFPNLTAAPHISTAPDVWLLGSSGESALLAAESGAGYMFAHFINGEGGE 199
:..|:|||:|.:.|||:||:|||||.||.|||::||||.||.||||||||
BPUM_3457___y 150 YPLPHLTASPKVETAPEVWMLGSSGGSARLAAKAGAGYTFALFINGEGGE 199
BSNT_05826___ 200 GTVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGAVLDFTLLAG 249
.:|.||..||:||..|:.||.::|||||||:|||:||:|...||.:|||.
BPUM_3457___y 200 DSVEQYINRFEPSAFGEEPRVSLAVFVLCAETEEQAEKLAVSLDLSLLAN 249
BSNT_05826___ 250 EQGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKKRLLAL 299
|||..|||.||||..:..:||||||:|:|.||.||:|||...|||:|.||
BPUM_3457___y 250 EQGQNLEGFPSYEKAQAYSYSPYEQKRVAANRQRMVVGTPSSVKKQLTAL 299
BSNT_05826___ 300 SKAYETEEIMVVTITHHFEDKLRSYRLLQEAFAD 333
:|||.|.|::.|||||..:|:|.|||||:|||..
BPUM_3457___y 300 TKAYRTNEVIAVTITHRMQDRLTSYRLLKEAFDA 333
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