Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05847 and BPUM_3478

See DNA alignment / Visit BSNT_05847 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence pep-align/BSNT_05847___ywcB.1.24716.seq
#    -bsequence pep-align/BPUM_3478___ywcB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05847___ywcB-BPUM_3478___ywcB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05847___ywcB-BPUM_3478___ywcB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05847___ywcB
# 2: BPUM_3478___ywcB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      62/104 (59.6%)
# Similarity:    80/104 (76.9%)
# Gaps:           2/104 ( 1.9%)
# Score: 345.0
# 
#
#=======================================

BSNT_05847___      1 --MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSLPVLTSYFT     48
                       ..|..||::||:..|:..|::||.||||..||||:|||||||.|||||
BPUM_3478___y      1 MADKKVHYKKVAASEDFRKLLEEKRRFIVPMTIFFFLFYFSLPVATSYFT     50

BSNT_05847___     49 FLNAPAIGAVSWAWLFAIAQFAMTWILSTVYSRRAAHFDRYVSALKEDLK     98
                     |||.|||||:|||||||:.||.|||:|..:|:::||.||:||||||.:.:
BPUM_3478___y     51 FLNTPAIGAISWAWLFALTQFVMTWVLCGLYAKKAAQFDKYVSALKIESR    100

BSNT_05847___     99 GEQI    102
                     |:..
BPUM_3478___y    101 GDDE    104


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