Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05931 and BPUM_3518

See DNA alignment / Visit BSNT_05931 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence pep-align/BSNT_05931___cydB.1.24716.seq
#    -bsequence pep-align/BPUM_3518___cydB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05931___cydB-BPUM_3518___cydB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05931___cydB-BPUM_3518___cydB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05931___cydB
# 2: BPUM_3518___cydB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity:     219/338 (64.8%)
# Similarity:   285/338 (84.3%)
# Gaps:           0/338 ( 0.0%)
# Score: 1244.0
# 
#
#=======================================

BSNT_05931___      1 MASLHDLWFILVAVLFVGFFFLEGFDFGVGMATRFLGHNELERRVLINTI     50
                     ||.|:::||||||||||||||||||||||||:.:.||.:..|||:|||||
BPUM_3518___c      1 MAYLNEIWFILVAVLFVGFFFLEGFDFGVGMSMQLLGKDAHERRILINTI     50

BSNT_05931___     51 GPFWDANEVWLLTGAGAIFAAFPNWYATMLSGYYIPFVIVLLALMGRGVA    100
                     |||||||||||:|..||||||||:|||||.|||||||.::||||:|||||
BPUM_3518___c     51 GPFWDANEVWLITAGGAIFAAFPHWYATMFSGYYIPFAVLLLALIGRGVA    100

BSNT_05931___    101 FEFRGKVDHLKWVKVWDWVVFFGSLIPPFVLGVLFTTLFRGMPIDADMNI    150
                     |||||||:...|:|.||||:|||||:|||:||||||::.||||||.|||:
BPUM_3518___c    101 FEFRGKVEKASWIKAWDWVIFFGSLLPPFLLGVLFTSILRGMPIDQDMNM    150

BSNT_05931___    151 HAHVSDYINVYSILGGVTVTLLCFQHGLMFITLRTIGDLQNRARKMAQKI    200
                     :|..:|::|:||::||:.||:||..|||:|:||||.|||::||||:.:::
BPUM_3518___c    151 YAGFTDFVNLYSVIGGLAVTVLCLLHGLIFVTLRTEGDLRDRARKLGKRV    200

BSNT_05931___    201 MGVVFVAVLAFAALSAYQTDMFTRRGEITIPLAVLIVICFMLAAVFIRKK    250
                     :.:....::.|..:|..:||::|.|..|||||.||||:|::.|..|::|:
BPUM_3518___c    201 LLIALPVLVLFVGVSIMETDIYTVRPIITIPLTVLIVVCYVAALFFMKKE    250

BSNT_05931___    251 KDGWTFGMTGAGLALTVGMIFISLFPRVMVSSLHSAYDLTVANASSGDYS    300
                     :|||||..||||:.:||.|:|.:||||||:||::..:|||:.||:||.||
BPUM_3518___c    251 RDGWTFLFTGAGIMVTVTMLFTALFPRVMISSINHTFDLTIQNAASGSYS    300

BSNT_05931___    301 LKVMSIAALTLLPFVIGSQIWSYYVFRKRVSHKEPMTY    338
                     |.||:|.|::|||||:|.|||||||||||||.||||||
BPUM_3518___c    301 LTVMTIVAISLLPFVLGYQIWSYYVFRKRVSGKEPMTY    338


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