Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05522 and BPUM_3544

See DNA alignment / Visit BSNT_05522 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence pep-align/BSNT_05522___ywqI.1.24716.seq
#    -bsequence pep-align/BPUM_3544___ywqIA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05522___ywqI-BPUM_3544___ywqIA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05522___ywqI-BPUM_3544___ywqIA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05522___ywqI
# 2: BPUM_3544___ywqIA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      38/87 (43.7%)
# Similarity:    57/87 (65.5%)
# Gaps:           1/87 ( 1.1%)
# Score: 189.0
# 
#
#=======================================

BSNT_05522___      1 MSEIKLKYDTVIKTLDSVKDALADVSI-GAAGSNGKNKLDYTKKYHEREE     49
                     |.:|||.|.||:..||.|..|:..::: .||...|:|.|::..|:..||.
BPUM_3544___y      1 MGQIKLNYQTVMNQLDEVSQAVEALTMKKAADKAGENSLEFVTKWTAREA     50

BSNT_05522___     50 NIKTMLGDYKKAVQKNIEDTKDNVDSLKEQDEAIAVK     86
                     .:..|:..:|:|:.||::||:.||.:|||||||||.|
BPUM_3544___y     51 EVNEMVSSFKEALTKNVQDTRSNVKTLKEQDEAIAAK     87


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.