Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06198 and BPUM_3687
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence pep-align/BSNT_06198___yycH.1.24716.seq
# -bsequence pep-align/BPUM_3687___yycH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06198___yycH-BPUM_3687___yycH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06198___yycH-BPUM_3687___yycH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06198___yycH
# 2: BPUM_3687___yycH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 464
# Identity: 246/464 (53.0%)
# Similarity: 326/464 (70.3%)
# Gaps: 11/464 ( 2.4%)
# Score: 1276.0
#
#
#=======================================
BSNT_06198___ 1 ---MKRENIKTILLTVLVVISLVFTWGIWTFQPNFSEGSSSTESTVREKH 47
||||..|||:||:|:.|||||||.||.|||...:.:.:....|..|.
BPUM_3687___y 1 MIGMKRETFKTIILTILIAISLVFTWNIWMFQPVMQDQADAGTQVVETKK 50
BSNT_06198___ 48 KIEKTTQKLSETVRPRDMFIHDDGAHYKVDDNALYEEIWSDLPHWDVKGI 97
......:.|.:.|:||:||||.:|.|.|||...|::..|:|:..||||.|
BPUM_3687___y 51 ISSDEPRSLIDVVKPREMFIHSNGEHLKVDQKELFQNFWNDVSLWDVKEI 100
BSNT_06198___ 98 KDISDQYDKAGFKSWFYGIGGSEAKLDLQFSDTIPIDIFQTLFKWSNQSF 147
.|:||||.:..||::|||.||....|||.|:|.|||||||.||||.|:|.
BPUM_3687___y 101 SDVSDQYSEQKFKNFFYGNGGQGKTLDLVFNDPIPIDIFQALFKWPNKSI 150
BSNT_06198___ 148 EYSSFDHILIPFN-ETKANKKIYLVSYSKQLILEVTVESANYRNIMNDLK 196
||:|||.:::||: :.|||||:|||||||:.:||:|:|||||||:|:.:.
BPUM_3687___y 151 EYNSFDRMIVPFSQQDKANKKVYLVSYSKETVLELTIESANYRNLMDSIA 200
BSNT_06198___ 197 NRQSNMPAFSL--FSIGSKKEFLLPNKPLTMDKKEFVTESIKTNTFKQAL 244
..|:.||.:.| ||..||::||||.|...::.|.|..|:|||:.||.||
BPUM_3687___y 201 AAQNEMPRYDLYTFSANSKRDFLLPRKQEQLESKMFFIETIKTSKFKDAL 250
BSNT_06198___ 245 FSDPSIVREDSNYNNRNVLTDGISRLDVNLSQRQVQFQQRNLVQSTSYQT 294
|:|||:|.|:||. ||.|.|||.|||:.|....::|:|.||:..||.:||
BPUM_3687___y 251 FTDPSLVGEESNL-NRTVYTDGTSRLEANQKDHRIQYQHRNINSSTVFQT 299
BSNT_06198___ 295 GELIKKSQKYLEDTGSWTDHYQFFNINDSQQLSFYIFMDQIPVINSTAKP 344
|:|||:|.||..||||:||.||:|.||.:|||||.:|||.:|::|||..|
BPUM_3687___y 300 GDLIKRSVKYFNDTGSFTDDYQYFGINSNQQLSFNMFMDGLPIVNSTKHP 349
BSNT_06198___ 345 FGATSAITVQWANDDILSYKRPNYSLGTNPIKTSETELMSGSEVRMLLSK 394
||.|| :.|||||||||:||||||.||....::.:.:||:|:|::.|:.|
BPUM_3687___y 350 FGMTS-LEVQWANDDILNYKRPNYILGNKASQSEQVKLMNGTELKDLIVK 398
BSNT_06198___ 395 QTAY-DTDKIDQIFLAYQLVSTSTNDDP--LVELEPVWAMKVNGKIVPIT 441
||.| |.:||:|||.|||..||:::.|. .|.|||||.||.|||.|.::
BPUM_3687___y 399 QTKYDDLEKIEQIFPAYQAASTASDQDQAMFVWLEPVWCMKYNGKTVILS 448
BSNT_06198___ 442 KDLLRKEGANSGVE 455
.|||.:...|.|||
BPUM_3687___y 449 HDLLTEGSENHGVE 462
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