Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00313 and BPUM_3700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:14
# Commandline: needle
# -asequence pep-align/BSNT_00313___ybbB.1.24716.seq
# -bsequence pep-align/BPUM_3700___ybbB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00313___ybbB-BPUM_3700___ybbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00313___ybbB-BPUM_3700___ybbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00313___ybbB
# 2: BPUM_3700___ybbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity: 209/546 (38.3%)
# Similarity: 314/546 (57.5%)
# Gaps: 25/546 ( 4.6%)
# Score: 1012.0
#
#
#=======================================
BSNT_00313___ 1 --------MQNA--VIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGN 40
:.:| .||:.:.:|.:..|:....||||:|::.|:|.||.:
BPUM_3700___y 1 MNNNPRPELTDAGHFIYRLISVEKIHHTALPHVEQQLSDAYCLLFSLKSS 50
BSNT_00313___ 41 GYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACLIRLQSYIKEA 90
|::.|......|..:|||...||:||......:...:..|:|...|...
BPUM_3700___y 51 GFLFINDKKGRLTDETLYTIMPNDTFMLDTVPNQKHELYLVRFHIYAML- 99
BSNT_00313___ 91 GQDIFTPCTESELAKL----KLINVSHIENLAVRLQELAALWNESSQLSQ 136
.|...|.::.....| :.::....:.:...|.::..||.::..:..
BPUM_3700___y 100 -HDEIIPISQENAKSLLNAWQFVHTDAFDQIHYSLSQMIDLWKKNDSVHS 148
BSNT_00313___ 137 LKCGIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLS 186
.:|.:..||||..|.|.......||..|:.|||.||..|:|..|.||.|:
BPUM_3700___y 149 FQCQLLFQSLILKLLTLHQHKVGDTAQALLKTKQYINDHSDEPIRLATLA 198
BSNT_00313___ 187 QMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKLLMAKSNCKLKEIAH 236
:|||||..||||.|||..|||||:::|:.|:|:||.|:|:.:.||:.||.
BPUM_3700___y 199 KMAGISPNHYSEQFKKQFGQSVTDYVTRKRLTRAKQLIAQGHNKLRNIAQ 248
BSNT_00313___ 237 QTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHI 286
:.||||.:||||:|||.||.:|:.|||.|::||.|||...:|...|||.:
BPUM_3700___y 249 EIGYQDPYYFSRLFKKKTGITPSQYMKSRQRKIIAYGPSILGQFTPLHLL 298
BSNT_00313___ 287 PFAAALHPKWTSYYYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVI 336
|:||.||||||:|.::||..|||:.|:|:|.|:..|.::..:.:|:|::|
BPUM_3700___y 299 PYAAPLHPKWTAYDFEHYGDDIPIHLNAHRVNQHSEIDIQQVQKAQPELI 348
BSNT_00313___ 337 VSMDSISPEEQDRLNRIAEVMYLPSE-ESWRTHFLQTASFLKEESEAEKW 385
::.|.|:.||::.|..|..|.::|.: .:||..|.:||:.|.||.|||:|
BPUM_3700___y 349 IANDQITKEEKEALQSICPVHFVPFKLLNWRAQFQETAALLGEEKEAEEW 398
BSNT_00313___ 386 LADYDQQTTAAKKTLQHVQGLRFLFLRLHKQNFYLAHNRSVREVFFGDLG 435
|..||:.....|:...| :....|.:|:::...||..||::.||...::|
BPUM_3700___y 399 LIHYDELVEYTKRVCSH-RKKTMLPIRVYQDQLYLYVNRTMSEVILEEIG 447
BSNT_00313___ 436 LSSATTADTPS--EQAISLENIANYQADCMMLFLFKEPETIAYYQQLQQT 483
:..| ...|.| ||.|.:..|.....||:.|.|.|||:|||:|.||:|.
BPUM_3700___y 448 VPPA-FHQTSSLIEQKIDIAFIQQCDPDCIFLLLHKEPDTIAFYHQLKQQ 496
BSNT_00313___ 484 EAWQNLSAVRNKRVYLLSLDPWNEYSACGHERIVQQTVSLLSGDCP 529
|||||:.||..:.||.||.|||.||||..|.|::|..:|...
BPUM_3700___y 497 EAWQNIRAVARQAVYSLSSDPWREYSAASHLRVIQHLLSFYP---- 538
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