Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00311 and BPUM_3701

See DNA alignment / Visit BSNT_00311 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:13
# Commandline: needle
#    -asequence pep-align/BSNT_00311___feuA.1.24716.seq
#    -bsequence pep-align/BPUM_3701___feuA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00311___feuA-BPUM_3701___feuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00311___feuA-BPUM_3701___feuA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00311___feuA
# 2: BPUM_3701___feuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity:     182/323 (56.3%)
# Similarity:   239/323 (74.0%)
# Gaps:           6/323 ( 1.9%)
# Score: 952.0
# 
#
#=======================================

BSNT_00311___      1 MKKISLTLLILLLALTAAACGSKNESTASKASGTASE---KKKIEYLDKT     47
                     |||.:..|.|.::.:..:|||:.:::||:....|::|   |.:||||.||
BPUM_3701___f      1 MKKWAAFLFICMVMIITSACGNGDQTTATTKKTTSTETPAKAEIEYLGKT     50

BSNT_00311___     48 YEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSGKFPDMFKDITDKA     97
                     |||..|..::.|.||:|||||||||.:||.||.:..|.||.:|:|||.|.
BPUM_3701___f     51 YEVNTPAKRLVIAGSLESMEDAKLLGIHPIGASTVGGTFPSLFEDITSKT    100

BSNT_00311___     98 KPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISS    147
                     :..|||.|||.||||::||||||.|||||..|:||::...||||||||||
BPUM_3701___f    101 EGIGEKTEPNAEKILKLKPDVILGSTKFPPATIQKLAKIQTTIPVSHISS    150

BSNT_00311___    148 NWKENMMLLAQLTGKEKKAKKIIADYEQDLKETKTKINDKAKDSKALVIR    197
                     :||.|::||.||||||.:.|.|||:|::||::.|..:.:.:|:..|:::|
BPUM_3701___f    151 DWKANLILLGQLTGKETEVKTIIANYQKDLEKAKKTLKETSKNKTAIILR    200

BSNT_00311___    198 IRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKAAKAQELISLEKLSEMNP    247
                     ||||::|:|||.||||||||||||..||||||.||||.|:|||:|.|::|
BPUM_3701___f    201 IRQGDLYVYPEDVYFNSTLYGDLGFTAPNEVKKAKAQSLLSLERLGELDP    250

BSNT_00311___    248 DHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPLAQG    297
                     |:||:|||::|||..|.||||||.|.||.||:|||:.||..|.||||.||
BPUM_3701___f    251 DYIFIQFSEEENASNPKALKDLESNQIWASLQAVKQGHVSENIVDPLLQG    300

BSNT_00311___    298 GTAWSKVRFLKAAAEKLTQN---    317
                     |||.||..||:.|...|:..   
BPUM_3701___f    301 GTALSKTTFLEQAVNWLSSKKTE    323


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.