Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06232 and BPUM_3708

See DNA alignment / Visit BSNT_06232 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence pep-align/BSNT_06232___ppaC.1.24716.seq
#    -bsequence pep-align/BPUM_3708___ppaC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06232___ppaC-BPUM_3708___ppaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06232___ppaC-BPUM_3708___ppaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06232___ppaC
# 2: BPUM_3708___ppaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     246/309 (79.6%)
# Similarity:   279/309 (90.3%)
# Gaps:           1/309 ( 0.3%)
# Score: 1254.0
# 
#
#=======================================

BSNT_06232___      1 MEKILIFGHQNPDTDTICSAIAYADLKNKLGFNAEPVRLGQVNGETQYAL     50
                     |.|.|:|||:|||||||||||||||||||:|..||.||||::|||||:||
BPUM_3708___p      1 MGKTLVFGHKNPDTDTICSAIAYADLKNKIGVEAEAVRLGEINGETQFAL     50

BSNT_06232___     51 DYFKQESPRLVETAANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRI    100
                     |:||||:||.:||||||...||||||||.|||:.||::|||.||||||||
BPUM_3708___p     51 DFFKQEAPRFIETAANETKQVILVDHNEFQQSVSDIDQVQVTEVIDHHRI    100

BSNT_06232___    101 ANFETAEPLYYRAEPVGCTATILNKMYKENNVKIEKEIAGLMLSAIISDS    150
                     |||||:||||||||||||||||||||||||.||||||||||:||||||||
BPUM_3708___p    101 ANFETSEPLYYRAEPVGCTATILNKMYKENQVKIEKEIAGLLLSAIISDS    150

BSNT_06232___    151 LLFKSPTCTDQDVAAAKELAEIAGVNAEEYGLNMLKAGADLSKKTVEELI    200
                     |||||||||.||:.||.||||||||:.|.|||:|||||||||:|||:|||
BPUM_3708___p    151 LLFKSPTCTQQDIDAAHELAEIAGVDPEVYGLDMLKAGADLSQKTVQELI    200

BSNT_06232___    201 SLDAKEFTLGSKKVEIAQVNTVDIEDVKKRQAELEAVISKVVAEKNLDLF    250
                     ::|||||.||:.||||||||||||.:|..||.::||.|::|:|.|.||||
BPUM_3708___p    201 TIDAKEFALGNSKVEIAQVNTVDIAEVTARQTDIEAKINEVIAAKGLDLF    250

BSNT_06232___    251 LLVITDILENDSLALAIGNEAAKVEKAFNVTLENNTALLKGVVSRKKQVV    300
                     :|||||||||||||||:|.|||||||||:|||||||||||||||||||||
BPUM_3708___p    251 VLVITDILENDSLALALGAEAAKVEKAFHVTLENNTALLKGVVSRKKQVV    300

BSNT_06232___    301 PVLTDAMAE    309
                     |.||||:: 
BPUM_3708___p    301 PALTDALS-    308


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