Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00027 and BSU00130

See DNA alignment / Visit BSNT_00027 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:51
# Commandline: needle
#    -asequence pep-align/BSNT_00027___serS.1.22522.seq
#    -bsequence pep-align/BSU00130___serS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00027___serS-BSU00130___serS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00027___serS-BSU00130___serS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00027___serS
# 2: BSU00130___serS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     424/444 (95.5%)
# Similarity:   425/444 (95.7%)
# Gaps:          19/444 ( 4.3%)
# Score: 2191.0
# 
#
#=======================================

BSNT_00027___      1 MGMRALFIFDKSIKKGVFRMLDTKMLRANFQEIKAKLVHKGEDLTDFDKF     50
                                        |||||||||||||||||||||||||||||||
BSU00130___se      1 -------------------MLDTKMLRANFQEIKAKLVHKGEDLTDFDKF     31

BSNT_00027___     51 EALDDRRRELIGKVEELKGKRNEVSQQVAVLKREKKEADHIIKEMREVGE    100
                     ||||||||||||||||||||||||||||||||||||:|||||||||||||
BSU00130___se     32 EALDDRRRELIGKVEELKGKRNEVSQQVAVLKREKKDADHIIKEMREVGE     81

BSNT_00027___    101 EIKKLDEELRTVEAELDTILLSIPNIPHESVPVGETEDDNVEVRKWGEKP    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se     82 EIKKLDEELRTVEAELDTILLSIPNIPHESVPVGETEDDNVEVRKWGEKP    131

BSNT_00027___    151 SFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALYNFM    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se    132 SFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALYNFM    181

BSNT_00027___    201 LDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se    182 LDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPT    231

BSNT_00027___    251 AEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQF    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se    232 AEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQF    281

BSNT_00027___    301 NKVELVKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se    282 NKVELVKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTA    331

BSNT_00027___    351 AKKYDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRREAKGKPEHVHT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se    332 AKKYDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRREAKGKPEHVHT    381

BSNT_00027___    401 LNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMGNREVMKP    444
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU00130___se    382 LNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMGNREVMKP    425


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.