Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00235 and BSU01310

See DNA alignment / Visit BSNT_00235 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:14
# Commandline: needle
#    -asequence pep-align/BSNT_00235___rplF.1.22522.seq
#    -bsequence pep-align/BSU01310___rplF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00235___rplF-BSU01310___rplF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00235___rplF-BSU01310___rplF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00235___rplF
# 2: BSU01310___rplF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:     179/179 (100.0%)
# Similarity:   179/179 (100.0%)
# Gaps:           0/179 ( 0.0%)
# Score: 904.0
# 
#
#=======================================

BSNT_00235___      1 MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIKVEDNV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp      1 MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIKVEDNV     50

BSNT_00235___     51 LTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKS    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp     51 LTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKS    100

BSNT_00235___    101 GNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01310___rp    101 GNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR    150

BSNT_00235___    151 AVRSPEPYKGKGIRYEGEVVRRKEGKSAK    179
                     |||||||||||||||||||||||||||||
BSU01310___rp    151 AVRSPEPYKGKGIRYEGEVVRRKEGKSAK    179


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