Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00306 and BSU01590

See DNA alignment / Visit BSNT_00306 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:18
# Commandline: needle
#    -asequence pep-align/BSNT_00306___ybaS.1.22522.seq
#    -bsequence pep-align/BSU01590___ybaS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00306___ybaS-BSU01590___ybaS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00306___ybaS-BSU01590___ybaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00306___ybaS
# 2: BSU01590___ybaS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     304/306 (99.3%)
# Similarity:   305/306 (99.7%)
# Gaps:           0/306 ( 0.0%)
# Score: 1522.0
# 
#
#=======================================

BSNT_00306___      1 MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGSLSANFQSLRHAL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01590___yb      1 MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGSLSANFQSLRHAL     50

BSNT_00306___     51 SHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTITGLTLAVVIPTGIT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01590___yb     51 SHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTITGLTLAVVIPTGIT    100

BSNT_00306___    101 SLIWAAMYKGNVGLTLSIILIDTVLSPLIVPLSLSLLAGAQVHMDVWGMM    150
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
BSU01590___yb    101 SLIWAAMYKGNVGLTLSIILVDTVLSPLIVPLSLSLLAGAQVHMDVWGMM    150

BSNT_00306___    151 KGLIVMVVIPSFLGMLFNQMSSPERTASVSSALSPFSKLCLMAVIAINSS    200
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU01590___yb    151 KGLIVMVVIPSFLGMLFNQMSSPERTAFVSSALSPFSKLCLMAVIAINSS    200

BSNT_00306___    201 AIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMMKRRQEEIVSLIF    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01590___yb    201 AIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMMKRRQEEIVSLIF    250

BSNT_00306___    251 TGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAALFGYMLNRFELK    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01590___yb    251 TGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAALFGYMLNRFELK    300

BSNT_00306___    301 PMLQKA    306
                     ||||||
BSU01590___yb    301 PMLQKA    306


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.