Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00308 and BSU01600

See DNA alignment / Visit BSNT_00308 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:18
# Commandline: needle
#    -asequence pep-align/BSNT_00308.1.22522.seq
#    -bsequence pep-align/BSU01600___ybbA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00308-BSU01600___ybbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00308-BSU01600___ybbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00308
# 2: BSU01600___ybbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     248/250 (99.2%)
# Similarity:   248/250 (99.2%)
# Gaps:           0/250 ( 0.0%)
# Score: 1299.0
# 
#
#=======================================

BSNT_00308         1 MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQNQIELLE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01600___yb      1 MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQNQIELLE     50

BSNT_00308        51 SAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01600___yb     51 SAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSD    100

BSNT_00308       101 ITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01600___yb    101 ITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGS    150

BSNT_00308       151 ISGSYWYENAAETIHISSLKPGTARVFMSIGSEEGCEKQSIQRHMLKKTK    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU01600___yb    151 ISGSYWYENAAETIHISSLKPGTARVFMSIGSEEGREKQSIQRHMLKKTK    200

BSNT_00308       201 QVHQSLKEKGFTEDQLCLSIEKGAVHHRKYFCKQFINALEWLYGKNRSTL    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU01600___yb    201 QVHQSLKEKGFTEDQLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL    250


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