Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00358 and BSU02000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:24
# Commandline: needle
# -asequence pep-align/BSNT_00358.1.22522.seq
# -bsequence pep-align/BSU02000___ybdJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00358-BSU02000___ybdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00358-BSU02000___ybdJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00358
# 2: BSU02000___ybdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 102/229 (44.5%)
# Similarity: 106/229 (46.3%)
# Gaps: 121/229 (52.8%)
# Score: 525.5
#
#
#=======================================
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 1 MKGYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQKVDLVI 50
BSNT_00358 0 -------------------------------------------------- 0
BSU02000___yb 51 MDVMLPGEDGYQMSAKIKKLGLGIPVIFLSARNDMDSKLQGLQIGEDYMV 100
BSNT_00358 1 ---------------MFYTYGIIDNFYSYTQIKHLYIDAVTKKVFNESLH 35
:.:.|| ::|||||||||||||||||||||
BSU02000___yb 101 KPFDPRELLLRMRNMLEHHYG------TFTQIKHLYIDAVTKKVFNESLH 144
BSNT_00358 36 DEVLFTAIERKIFFYLYENRDSILTKEHFFEYLWQLEDRNPNIVNVHIKK 85
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02000___yb 145 DEVLFTAIERKIFFYLYENRDSILTKEHFFEYLWQLEDRNPNIVNVHIKK 194
BSNT_00358 86 IRAKINDQAGEMIENIYGEGYRLNTVVKK 114
|||||||||||||||||||||||||||||
BSU02000___yb 195 IRAKINDQAGEMIENIYGEGYRLNTVVKK 223
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