Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00359 and BSU02010

See DNA alignment / Visit BSNT_00359 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:24
# Commandline: needle
#    -asequence pep-align/BSNT_00359___ybdK.1.22522.seq
#    -bsequence pep-align/BSU02010___ybdK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00359___ybdK-BSU02010___ybdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00359___ybdK-BSU02010___ybdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00359___ybdK
# 2: BSU02010___ybdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity:     316/328 (96.3%)
# Similarity:   317/328 (96.6%)
# Gaps:           8/328 ( 2.4%)
# Score: 1609.0
# 
#
#=======================================

BSNT_00359___      1 MKLKTKYQLLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGTPFHRSF     50
                             :||||||||||||||||||||||||||||||||||.||||||
BSU02010___yb      1 --------MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSF     42

BSNT_00359___     51 AYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02010___yb     43 AYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDK     92

BSNT_00359___    101 IEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02010___yb     93 IEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINT    142

BSNT_00359___    151 PLTALRLHLFYLEDQCHGQAVFESLYQQIEYISELTNEFNLYSAETLESS    200
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU02010___yb    143 PLTALRLQLFYLEDQCHGQAVFESLYQQIEYISELTNEFNLYSAETLESS    192

BSNT_00359___    201 YIVNEEVRLNELLETAVKKWDYLYSMSGIELHYKPADQDVIWMSNALWME    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU02010___yb    193 YIVNEEVRLNELLETAVKKWDYLYSMSGIELHYKPADQDVIWMSNTLWME    242

BSNT_00359___    251 RLFDNIFQNTLRHSKAKKMEVTIEHGDVFIRDDGIGFDRNESSEGLGLKI    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02010___yb    243 RLFDNIFQNTLRHSKAKKMEVTIEHGDVFIRDDGIGFDRNESSEGLGLKI    292

BSNT_00359___    301 IEDTCRLLAITYELHTNDNGTGFLFSKE    328
                     ||||||||||||||||||||||||||||
BSU02010___yb    293 IEDTCRLLAITYELHTNDNGTGFLFSKE    320


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