Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00470 and BSU02650

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:36
# Commandline: needle
#    -asequence pep-align/BSNT_00470___pcp.1.22522.seq
#    -bsequence pep-align/BSU02650___pcp.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00470___pcp-BSU02650___pcp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00470___pcp-BSU02650___pcp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00470___pcp
# 2: BSU02650___pcp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity:     213/215 (99.1%)
# Similarity:   214/215 (99.5%)
# Gaps:           0/215 ( 0.0%)
# Score: 1110.0
# 
#
#=======================================

BSNT_00470___      1 MRKKVLITGFDPFDKETVNPSWEAAKRLNGFETEEAIITAEQIPTVFRSA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02650___pc      1 MRKKVLITGFDPFDKETVNPSWEAAKRLNGFETEEAIITAEQIPTVFRSA     50

BSNT_00470___     51 LDTLRQAIQKHQPDIVICVGQAGGRMQITPERVAINLADARIPDNEGHQP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02650___pc     51 LDTLRQAIQKHQPDIVICVGQAGGRMQITPERVAINLADARIPDNEGHQP    100

BSNT_00470___    101 IDEEISPDGPAAYWTGLPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYG    150
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU02650___pc    101 IDEEISPDGPAAYWTRLPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYG    150

BSNT_00470___    151 LMDYISRTSPHIRGGFIHIPYIPQQTIDKTAPSLSLDTIVRALRIAAVTA    200
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU02650___pc    151 LMDHISRTSPHIRGGFIHIPYIPQQTIDKTAPSLSLDTIVRALRIAAVTA    200

BSNT_00470___    201 AQYDEDVKSPGGTLH    215
                     |||||||||||||||
BSU02650___pc    201 AQYDEDVKSPGGTLH    215


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