Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00543 and BSU03060

See DNA alignment / Visit BSNT_00543 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:43
# Commandline: needle
#    -asequence pep-align/BSNT_00543.1.22522.seq
#    -bsequence pep-align/BSU03060___lctP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00543-BSU03060___lctP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00543-BSU03060___lctP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00543
# 2: BSU03060___lctP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity:     396/541 (73.2%)
# Similarity:   399/541 (73.8%)
# Gaps:         135/541 (25.0%)
# Score: 1966.0
# 
#
#=======================================

BSNT_00543         0 --------------------------------------------------      0
                                                                       
BSU03060___lc      1 MWEQLYDPFGNEYVSALVALTPILFFLLALTVLKMKGILAAFLTLAVSFF     50

BSNT_00543         0 --------------------------------------------------      0
                                                                       
BSU03060___lc     51 VSVWAFHMPVEKAISSVLLGIGSGLWPIGYIVLMAVWLYKIAVKTGKFTI    100

BSNT_00543         1 -----------------------------------MVFRLAALLVELGFK     15
                                                        .:...||||||||||
BSU03060___lc    101 IRSSIAGISPDQRLQLLLIGFCFNAFLEGAAGFGVPIAISAALLVELGFK    150

BSNT_00543        16 PLKAAALCLIANAASGAFGAIGIPVITGAQIGNLSALELSRTLMWTLPMI     65
                     ||||||||||||||||||||||||||||||||:|||||||||||||||||
BSU03060___lc    151 PLKAAALCLIANAASGAFGAIGIPVITGAQIGDLSALELSRTLMWTLPMI    200

BSNT_00543        66 SFLIPFLLVFLLDRMKGIKQTWPALLVVSGGYTAVQTLTMAVLGPELANI    115
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc    201 SFLIPFLLVFLLDRMKGIKQTWPALLVVSGGYTAVQTLTMAVLGPELANI    250

BSNT_00543       116 LAALFSMGGLALFLRKWQPKEIYREEGAGDAGEKKAYRAADIAKAWSPFY    165
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc    251 LAALFSMGGLALFLRKWQPKEIYREEGAGDAGEKKAYRAADIAKAWSPFY    300

BSNT_00543       166 ILTAAITIWSLPAFKALFQEGGLLYQSTLLFKMPFLHQQIMKMPPIAPSA    215
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc    301 ILTAAITIWSLPAFKALFQEGGLLYQSTLLFKMPFLHQQIMKMPPIAPSA    350

BSNT_00543       216 MPLDAVFKVDLLSATGTSILAAVIVTGLFSKNFSCRDAFASLKETGKELW    265
                     |||||||||||||||||:|||||||||||||.||.|||||||||||||||
BSU03060___lc    351 MPLDAVFKVDLLSATGTAILAAVIVTGLFSKKFSSRDAFASLKETGKELW    400

BSNT_00543       266 VPIMTICFVMGFANLANFAGLSSSIGLALAKTGDLFPFVSPVLGWIGVFI    315
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc    401 VPIMTICFVMGFANLANFAGLSSSIGLALAKTGDLFPFVSPVLGWIGVFI    450

BSNT_00543       316 TGSVVSNNALFGHLQVVTGAQIGAGSDLLLAANTAGGVMAKLVSPQSIAI    365
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03060___lc    451 TGSVVSNNALFGHLQVVTGAQIGAGSDLLLAANTAGGVMAKLVSPQSIAI    500

BSNT_00543       366 AAAAVGQTGKESKLFKRTVAYSLILLLIICIWMFILARLGV    406
                     ||||||||||||||||||||||||||||||||.||||||||
BSU03060___lc    501 AAAAVGQTGKESKLFKRTVAYSLILLLIICIWTFILARLGV    541


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.