Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00551 and BSU03120
See
DNA alignment /
Visit
BSNT_00551 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:44
# Commandline: needle
# -asequence pep-align/BSNT_00551.1.22522.seq
# -bsequence pep-align/BSU03120___ycgI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00551-BSU03120___ycgI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00551-BSU03120___ycgI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00551
# 2: BSU03120___ycgI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 163/200 (81.5%)
# Similarity: 163/200 (81.5%)
# Gaps: 30/200 (15.0%)
# Score: 851.5
#
#
#=======================================
BSNT_00551 1 MTQQYIVEPKKGLGLKLKKGQILKVVDVEGQQVADFVAYHAKDFYEHLDQ 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03120___yc 1 MTQQYIVEPKKGLGLKLKKGQILKVVDVEGQQVADFVAYHAKDFYEHLDQ 50
BSNT_00551 51 GATIDANHSIHVKVNDHLYSNLYKPMLTLIEDTVGKHDLLLPACRPDMNR 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03120___yc 51 GATIDANHSIHVKVNDHLYSNLYKPMLTLIEDTVGKHDLLLPACRPDMNR 100
BSNT_00551 101 LLYGKQKDEFQDTCYDNMNRALEQFGVPKPHMHYPFAIFMNTVLDEKGNL 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03120___yc 101 LLYGKQKDEFQDTCYDNMNRALEQFGVPKPHMHYPFAIFMNTVLDEKGNL 150
BSNT_00551 151 SVETPLSNAGDGFNCRVFFLPD---------------------------- 172
|||||||||||....|... |
BSU03120___yc 151 SVETPLSNAGDYVRLRAEM--DLIVAFSSCPIEKGKCNGDSVTSIRVEVS 198
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.