Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00594 and BSU03360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:49
# Commandline: needle
# -asequence pep-align/BSNT_00594.1.22522.seq
# -bsequence pep-align/BSU03360___yciC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00594-BSU03360___yciC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00594-BSU03360___yciC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00594
# 2: BSU03360___yciC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 211/402 (52.5%)
# Similarity: 215/402 (53.5%)
# Gaps: 180/402 (44.8%)
# Score: 1052.0
#
#
#=======================================
BSNT_00594 1 MKKIPVTVLSGYLGAGKTTLLNSILQNREGLKIAVIVNDMSEVNIDAGLV 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 1 MKKIPVTVLSGYLGAGKTTLLNSILQNREGLKIAVIVNDMSEVNIDAGLV 50
BSNT_00594 51 KQEGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLAKDGRFDYIVIEST 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 51 KQEGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLAKDGRFDYIVIEST 100
BSNT_00594 101 GISEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDANRFWHDYQSGES 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03360___yc 101 GISEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDANRFWHDYQSGES 150
BSNT_00594 151 LLDRKEALGEEDEREIADLLIDQIEFCDVLILNKCDLVSEQELEQLENVL 200
||||||||||:|||||||||||||||||||||||||||||||||||||||
BSU03360___yc 151 LLDRKEALGEKDEREIADLLIDQIEFCDVLILNKCDLVSEQELEQLENVL 200
BSNT_00594 201 RKLQPRAKFIRCQRKCKTAGDFAYRVI----------------------- 227
|||||||:||| ...|:...:.|
BSU03360___yc 201 RKLQPRARFIR-----SVKGNVKPQEILHTGLFNFEEASGSAGWIQELTA 245
BSNT_00594 227 -------------------------------------------------- 227
BSU03360___yc 246 GHAEHTPETEEYGISSFVYKRRLPFHSTRFYRWLDQMPKNVVRAKGIVWC 295
BSNT_00594 227 -------------------------------------------------- 227
BSU03360___yc 296 ASHNNLALLMSQAGPSVTIEPVSYWVAALPKLEQEQVKQQEPEILEEWDP 345
BSNT_00594 227 -------------------------------------------------- 227
BSU03360___yc 346 EFGDRLTQLVFIGTDLDEETITKELDQCLLTEYEFDSDWSLFEDPFKWKL 395
BSNT_00594 227 -- 227
BSU03360___yc 396 NQ 397
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