Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00714 and BSU04070

See DNA alignment / Visit BSNT_00714 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:03
# Commandline: needle
#    -asequence pep-align/BSNT_00714___ycsI.1.22522.seq
#    -bsequence pep-align/BSU04070___ycsI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00714___ycsI-BSU04070___ycsI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00714___ycsI-BSU04070___ycsI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00714___ycsI
# 2: BSU04070___ycsI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     257/263 (97.7%)
# Similarity:   257/263 (97.7%)
# Gaps:           6/263 ( 2.3%)
# Score: 1354.0
# 
#
#=======================================

BSNT_00714___      1 MEQLNKMAPKDVRALIREGKINGPTAGMSGGYAQANLVVLKKDLAFDFLL     50
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU04070___yc      1 ------MAPKDVRALIREGKINGPTAGMSGGYAQANLVVLKKDLAFDFLL     44

BSNT_00714___     51 FCQRNQKPCPVLDVTEAGSPVPSLAAPDADIRTDFPKYRIYRHGILTEEV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04070___yc     45 FCQRNQKPCPVLDVTEAGSPVPSLAAPDADIRTDFPKYRIYRHGILTEEV     94

BSNT_00714___    101 SDITPYWEDDFVGFLIGCSFSFEQALINNGIAVRHIDEGTNVSMYKTNID    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04070___yc     95 SDITPYWEDDFVGFLIGCSFSFEQALINNGIAVRHIDEGTNVSMYKTNID    144

BSNT_00714___    151 CVPAGAFHGQMVVSMRPVPERLAVRAAQVTSRFPAVHGGPIHIGNPGAIG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04070___yc    145 CVPAGAFHGQMVVSMRPVPERLAVRAAQVTSRFPAVHGGPIHIGNPGAIG    194

BSNT_00714___    201 IRDLGKPDFGDAVSIRDGEVPVFWACGVTPQAVAMNVKPEMVITHAPGHM    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04070___yc    195 IRDLGKPDFGDAVSIRDGEVPVFWACGVTPQAVAMNVKPEMVITHAPGHM    244

BSNT_00714___    251 LITDIRDESLAVL    263
                     |||||||||||||
BSU04070___yc    245 LITDIRDESLAVL    257


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