Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00801 and BSU04700

See DNA alignment / Visit BSNT_00801 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence pep-align/BSNT_00801___rsbU.1.22522.seq
#    -bsequence pep-align/BSU04700___rsbU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00801___rsbU-BSU04700___rsbU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00801___rsbU-BSU04700___rsbU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00801___rsbU
# 2: BSU04700___rsbU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     334/335 (99.7%)
# Similarity:   334/335 (99.7%)
# Gaps:           0/335 ( 0.0%)
# Score: 1721.0
# 
#
#=======================================

BSNT_00801___      1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs      1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISI     50

BSNT_00801___     51 HRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEHQTLRGIQQEIKSE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs     51 HRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEHQTLRGIQQEIKSE    100

BSNT_00801___    101 IEIAANVQQTLLGTKVPQEEALDIGAISVPAKQMSGDYYHFVKDKESINI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    101 IEIAANVQQTLLGTKVPQEEALDIGAISVPAKQMSGDYYHFVKDKESINI    150

BSNT_00801___    151 AIADVIGKGIPAALCMSMIKYAMDSLPETGIHPSQVLKNLNRVVEQNVDA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    151 AIADVIGKGIPAALCMSMIKYAMDSLPETGIHPSQVLKNLNRVVEQNVDA    200

BSNT_00801___    201 SMFITMFYANYNMDNHQFTYASAGHEPGFYYSQKDNTFYDLEAKGLVLGI    250
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU04700___rs    201 SMFITMFYANYNMDKHQFTYASAGHEPGFYYSQKDNTFYDLEAKGLVLGI    250

BSNT_00801___    251 SQDYDYKQFDQHLEKGDMIVLFSDGVTECRTENGFLERPDLQKLIEEHMC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04700___rs    251 SQDYDYKQFDQHLEKGDMIVLFSDGVTECRTENGFLERPDLQKLIEEHMC    300

BSNT_00801___    301 SSAQEMVKNIYDSLLKLQDFQLHDDFTLIVLRRKV    335
                     |||||||||||||||||||||||||||||||||||
BSU04700___rs    301 SSAQEMVKNIYDSLLKLQDFQLHDDFTLIVLRRKV    335


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.