Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01178 and BSU06930

See DNA alignment / Visit BSNT_01178 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:50
# Commandline: needle
#    -asequence pep-align/BSNT_01178.1.22522.seq
#    -bsequence pep-align/BSU06930___yesK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01178-BSU06930___yesK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01178-BSU06930___yesK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01178
# 2: BSU06930___yesK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 100
# Identity:      36/100 (36.0%)
# Similarity:    38/100 (38.0%)
# Gaps:          62/100 (62.0%)
# Score: 191.0
# 
#
#=======================================

BSNT_01178         0 --------------------------------------------------      0
                                                                       
BSU06930___ye      1 MSFSKREAGDVWSILFVTGIVTACLFAGVSVLMRMRFPDKSRPEWMLAGL     50

BSNT_01178         1 ------------MYVRGWEGAALGMLGFNVIYGAIAGYLIDKAIRRYRKR     38
                                 :||||||||||||||||||:||||||||||||||||||
BSU06930___ye     51 IVLGVFAIWYSLVYVRGWEGAALGMLGFNVIFGAIAGYLIDKAIRRYRKR    100


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