Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03930 and BSU27130

See DNA alignment / Visit BSNT_03930 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_03930___yrhM.1.22522.seq
#    -bsequence pep-align/BSU27130___rsiV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03930___yrhM-BSU27130___rsiV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03930___yrhM-BSU27130___rsiV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03930___yrhM
# 2: BSU27130___rsiV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     279/285 (97.9%)
# Similarity:   282/285 (98.9%)
# Gaps:           0/285 ( 0.0%)
# Score: 1406.0
# 
#
#=======================================

BSNT_03930___      1 MDKRLQQLREEYKNVPIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAA     50
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27130___rs      1 MDKRLQQLREEYKNVQIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAA     50

BSNT_03930___     51 ILFTALVNINPDAAQAMSRIPVIGKIVKAITFIEIKEEKDQSSIDVKTPA    100
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
BSU27130___rs     51 ILFTALVNINPDAAQAMSKIPVIGKIVKAITFIEIKEEKDQSSIDVKTPA    100

BSNT_03930___    101 LSGLSNKELENSINQKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETVT    150
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
BSU27130___rs    101 LSGLSNKELENSINEKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETVT    150

BSNT_03930___    151 DTPDLLSIRRNIEKTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIKV    200
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU27130___rs    151 DTPDLLSIRRNIETTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIKV    200

BSNT_03930___    201 ISQNIREQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTFYITEDHKLVI    250
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
BSU27130___rs    201 ISQNIKEQMKQQMKEDPNKIYWLTDEDAEPFKTILPDQTFYITEDHKLVI    250

BSNT_03930___    251 SFDEYEVAPGYMGVTEFTIPTSVISNLLVGERYIR    285
                     |||||||||||||||||||||.|||||||||||||
BSU27130___rs    251 SFDEYEVAPGYMGVTEFTIPTGVISNLLVGERYIR    285


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