Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04156 and BSU28490

See DNA alignment / Visit BSNT_04156 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_04156___uvrC.1.22522.seq
#    -bsequence pep-align/BSU28490___uvrC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04156___uvrC-BSU28490___uvrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04156___uvrC-BSU28490___uvrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04156___uvrC
# 2: BSU28490___uvrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 590
# Identity:     588/590 (99.7%)
# Similarity:   589/590 (99.8%)
# Gaps:           0/590 ( 0.0%)
# Score: 3037.0
# 
#
#=======================================

BSNT_04156___      1 MNKQLKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHD     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv      1 MNKQLKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHD     50

BSNT_04156___     51 AKTQRLVTEIEDFEYIVTSSNLEALILEMNLIKKHDPKYNVMLKDDKTYP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv     51 AKTQRLVTEIEDFEYIVTSSNLEALILEMNLIKKHDPKYNVMLKDDKTYP    100

BSNT_04156___    101 FIKLTHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    101 FIKLTHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRK    150

BSNT_04156___    151 CSKLPDRVCLYYHLGQCLAPCVKDISEETNRELVESITRFLRGGYNEVKK    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    151 CSKLPDRVCLYYHLGQCLAPCVKDISEETNRELVESITRFLRGGYNEVKK    200

BSNT_04156___    201 ELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKMTMNDLVDRDVFAY    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    201 ELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKMTMNDLVDRDVFAY    250

BSNT_04156___    251 AYDKGWMCVQVFFIRQGKLIERDVSMFPLYQEADEEFLTFIGQFYSKNNH    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    251 AYDKGWMCVQVFFIRQGKLIERDVSMFPLYQEADEEFLTFIGQFYSKNNH    300

BSNT_04156___    301 FLPKEILVPDSVDQSMIEQLLETNVHQPKKGPKKELLMLAHKNAKIALKE    350
                     |||||||||||:||||||||||||||||||||||||||||||||||||||
BSU28490___uv    301 FLPKEILVPDSIDQSMIEQLLETNVHQPKKGPKKELLMLAHKNAKIALKE    350

BSNT_04156___    351 KFSLIERDEERSIGAVQKLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIV    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    351 KFSLIERDEERSIGAVQKLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIV    400

BSNT_04156___    401 FIDGKPYKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLI    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    401 FIDGKPYKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLI    450

BSNT_04156___    451 IIDGGKGQINAARDVIENELGLDIPIAGLAKDEKHRTSNLLIGDPLEVVY    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU28490___uv    451 IIDGGKGQINAARDVIENELGLDIPIAGLAKDEKHRTSNLLIGDPLEVAY    500

BSNT_04156___    501 LERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRK    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    501 LERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRK    550

BSNT_04156___    551 KMLLKHFGSVKKMKEASLEDIKKAGVPAAAAQLLYDKLQK    590
                     ||||||||||||||||||||||||||||||||||||||||
BSU28490___uv    551 KMLLKHFGSVKKMKEASLEDIKKAGVPAAAAQLLYDKLQK    590


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.