Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04248 and BSU29100

See DNA alignment / Visit BSNT_04248 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_04248___phoR.1.22522.seq
#    -bsequence pep-align/BSU29100___phoR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04248___phoR-BSU29100___phoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04248___phoR-BSU29100___phoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04248___phoR
# 2: BSU29100___phoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity:     577/579 (99.7%)
# Similarity:   577/579 (99.7%)
# Gaps:           0/579 ( 0.0%)
# Score: 2909.0
# 
#
#=======================================

BSNT_04248___      1 MNKYRVRLFSVFVVCMILVFCVLGLFLQQLFETSDQRKAEEHIEKEAKYL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph      1 MNKYRVRLFSVFVVCMILVFCVLGLFLQQLFETSDQRKAEEHIEKEAKYL     50

BSNT_04248___     51 ASLLDAGNLNNQANEKIIKDAGGALDVSASVIDTDGKVLYGSNGRSADSQ    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph     51 ASLLDAGNLNNQANEKIIKDAGGALDVSASVIDTDGKVLYGSNGRSADSQ    100

BSNT_04248___    101 KVQALVSGHEGILSTTDNKLYYGLSLRSEGEKTGYVLLSASEKSDGLKGE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    101 KVQALVSGHEGILSTTDNKLYYGLSLRSEGEKTGYVLLSASEKSDGLKGE    150

BSNT_04248___    151 LWGMLTASLCTAFIVIVYFYSSMTSRYKRSIESATNVATELSKGNYDART    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    151 LWGMLTASLCTAFIVIVYFYSSMTSRYKRSIESATNVATELSKGNYDART    200

BSNT_04248___    201 YGGYIRRSDKLGHAMNSLAIDLMEMTRTQEMQRDRLLTVIENIGSGLIMI    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    201 YGGYIRRSDKLGHAMNSLAIDLMEMTRTQEMQRDRLLTVIENIGSGLIMI    250

BSNT_04248___    251 DGRGFINLVNRSYAKQFHINPNHMLRRLYHDAFEHEEVIQLVEDIFMTET    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    251 DGRGFINLVNRSYAKQFHINPNHMLRRLYHDAFEHEEVIQLVEDIFMTET    300

BSNT_04248___    301 KKCKLLRLPIKIERRYFEVDGVPIMGPDDEWKGIVLVFHDMTETKKLEQM    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    301 KKCKLLRLPIKIERRYFEVDGVPIMGPDDEWKGIVLVFHDMTETKKLEQM    350

BSNT_04248___    351 RKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSIILKESER    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    351 RKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSIILKESER    400

BSNT_04248___    401 LQSLVQDLLDLSKIEQQNFTLSIETFEPAKMLVEIETLLKHKADEKGISL    450
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU29100___ph    401 LQSLVQDLLDLSKIEQQNFTLSIETFEPAKMLGEIETLLKHKADEKGISL    450

BSNT_04248___    451 HLNVPKDPQYVSGDPYRLKQVFLNLVNNALTYTPEGGSVAINVKPREKDI    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    451 HLNVPKDPQYVSGDPYRLKQVFLNLVNNALTYTPEGGSVAINVKPREKDI    500

BSNT_04248___    501 QIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGLAIVKHLIEA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29100___ph    501 QIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGLAIVKHLIEA    550

BSNT_04248___    551 HEGKIDVTSEPGRGTVFTVTLKRAAEKSA    579
                     ||||||||||.||||||||||||||||||
BSU29100___ph    551 HEGKIDVTSELGRGTVFTVTLKRAAEKSA    579


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.