Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_04333 and BSU29760

See DNA alignment / Visit BSNT_04333 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_04333___ytxJ.1.22522.seq
#    -bsequence pep-align/BSU29760___ytxJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04333___ytxJ-BSU29760___ytxJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04333___ytxJ-BSU29760___ytxJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04333___ytxJ
# 2: BSU29760___ytxJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:     106/108 (98.1%)
# Similarity:   106/108 (98.1%)
# Gaps:           0/108 ( 0.0%)
# Score: 554.0
# 
#
#=======================================

BSNT_04333___      1 MAKQLIQSEEEFKRIAEQEGAFVFFKHSTTCPISQAAFHEFDAFANQHED     50
                     ||||||||||||||||||||.|||.|||||||||||||||||||||||||
BSU29760___yt      1 MAKQLIQSEEEFKRIAEQEGVFVFLKHSTTCPISQAAFHEFDAFANQHED     50

BSNT_04333___     51 VPAYYLQVQEARPLSNFIAETYGVKHESPQIFIIQNGEVKWHTSHSQITE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29760___yt     51 VPAYYLQVQEARPLSNFIAETYGVKHESPQIFIIQNGEVKWHTSHSQITE    100

BSNT_04333___    101 AAIEQHLS    108
                     ||||||||
BSU29760___yt    101 AAIEQHLS    108


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.