Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04685 and BSU31840

See DNA alignment / Visit BSNT_04685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence pep-align/BSNT_04685___yueD.1.22522.seq
#    -bsequence pep-align/BSU31840___yueD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04685___yueD-BSU31840___yueD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04685___yueD-BSU31840___yueD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04685___yueD
# 2: BSU31840___yueD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     243/243 (100.0%)
# Similarity:   243/243 (100.0%)
# Gaps:           0/243 ( 0.0%)
# Score: 1228.0
# 
#
#=======================================

BSNT_04685___      1 MELYIITGASKGLGQAIALQALEKGHEVHALSRTKTDVSHKKLTQHQIDL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31840___yu      1 MELYIITGASKGLGQAIALQALEKGHEVHALSRTKTDVSHKKLTQHQIDL     50

BSNT_04685___     51 INLEEAEQQFETLLSSIDSDRYSGITLINNAGMVTPIKRAGEASLDELQR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31840___yu     51 INLEEAEQQFETLLSSIDSDRYSGITLINNAGMVTPIKRAGEASLDELQR    100

BSNT_04685___    101 HYQLNLTAPVLLSQLFTKRFASYSGKKTVVNITSGAAKNPYKGWSAYCSS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31840___yu    101 HYQLNLTAPVLLSQLFTKRFASYSGKKTVVNITSGAAKNPYKGWSAYCSS    150

BSNT_04685___    151 KAGLDMFTRTFGFEQEDEELPVNMISFSPGVMDTEMQAVIRSSSKKDFHH    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31840___yu    151 KAGLDMFTRTFGFEQEDEELPVNMISFSPGVMDTEMQAVIRSSSKKDFHH    200

BSNT_04685___    201 IERFRKLNETGSLRSPDFIAGTLLSLLEKGTENGRIYDIKEFL    243
                     |||||||||||||||||||||||||||||||||||||||||||
BSU31840___yu    201 IERFRKLNETGSLRSPDFIAGTLLSLLEKGTENGRIYDIKEFL    243


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