Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04879 and BSU32880

See DNA alignment / Visit BSNT_04879 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_04879___yusP.1.22522.seq
#    -bsequence pep-align/BSU32880___yusP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04879___yusP-BSU32880___yusP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04879___yusP-BSU32880___yusP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04879___yusP
# 2: BSU32880___yusP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity:     539/541 (99.6%)
# Similarity:   539/541 (99.6%)
# Gaps:           0/541 ( 0.0%)
# Score: 2681.0
# 
#
#=======================================

BSNT_04879___      1 MKMSKEGKQSKRTLLITGLIIAMFFSALDGTIVGTAMPKIVGDLGGLSMM     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu      1 MKMSKEGKQSKRTLLITGLIIAMFFSALDGTIVGTAMPKIVGDLGGLSMM     50

BSNT_04879___     51 TWLTTAYLLTSTTIVPIAGKLADLLGRRIVYVSGLIIFMAASALCGMANN    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu     51 TWLTTAYLLTSTTIVPIAGKLADLLGRRIVYVSGLIIFMAASALCGMANN    100

BSNT_04879___    101 MTELIIFRGLQGIGGGIMMPMAMIVIGDLFTGKQRAKFQGVFGAIYGLAS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu    101 MTELIIFRGLQGIGGGIMMPMAMIVIGDLFTGKQRAKFQGVFGAIYGLAS    150

BSNT_04879___    151 VIGPQIGGWIVDSLNWKWVFYINLPVGIIAVIFIARGLQGRQQTGPINFD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu    151 VIGPQIGGWIVDSLNWKWVFYINLPVGIIAVIFIARGLQGRQQTGPINFD    200

BSNT_04879___    201 IAGIFTMIVGVVSLLLALSFGGKDYAWDSWQILGLFALALIGIVSFIIVE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu    201 IAGIFTMIVGVVSLLLALSFGGKDYAWDSWQILGLFALALIGIVSFIIVE    250

BSNT_04879___    251 SKAKEPILPMYLFKNRTFTFLNLIGFFMSIGMFGAITFVPFFMQGIVGVS    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu    251 SKAKEPILPMYLFKNRTFTFLNLIGFFMSIGMFGAITFVPFFMQGIVGVS    300

BSNT_04879___    301 ASESGTIMTPMMISMIITSIIGGQLVYKIGIKPQIIAGMLVMAGGFLLLT    350
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU32880___yu    301 ASESGTIMTPMMISMIITSIIGGQLVYKIGIKPQIITGMLVMAGGFLLLT    350

BSNT_04879___    351 TLDLDTSKLVATSFMAIIGLGMGLVMPILTLALQESFSKEELGVVTSSSQ    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu    351 TLDLDTSKLVATSFMAIIGLGMGLVMPILTLALQESFSKEELGVVTSSSQ    400

BSNT_04879___    401 FFRSIGGTFGITMLGAVMNARSGNLLTDKLVPYLDSLPAQASSFAAQLKG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu    401 FFRSIGGTFGITMLGAVMNARSGNLLTDKLVPYLDSLPAQASSFAAQLKG    450

BSNT_04879___    451 MIDTNPQGLLQSLFSPDAVKQIPAAFSSHIVPILKTSLMDSLHSVFYTGL    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32880___yu    451 MIDTNPQGLLQSLFSPDAVKQIPAAFSSHIVPILKTSLMDSLHSVFYTGL    500

BSNT_04879___    501 IFIAVGAVFTLFLKPIKLSNKKTEDQQEKEKAAKAVESPSH    541
                     ||||||||||||||||||||||.||||||||||||||||||
BSU32880___yu    501 IFIAVGAVFTLFLKPIKLSNKKAEDQQEKEKAAKAVESPSH    541


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.